barSeed - Barley Seed Development Database

Probe ABC42140

Source Contig ABC42140

barSeed

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Affymetrix Source Sequence (515 bp)

>ABC42140 515
TTGGTTTGGTCATGATGGGTTTGCAGAACCTGTCAAGTGCTTCAGCCTTCTTCTTTATGT
CAGAAACAAGGAGGACAGGATTAGCATGCTTCGGTAGAGCATCTTGCTGCTGCTTTTTCT
CCATTAGCCAGGTCTCTGCATCCGAGCACTCATTAACAACCTTTTGCTTCTCTGATATGT
CTATGTGATCAAACTTTTGATTGATGATGACATGATGGCGTTGGGCTCGGGAAAATAAGG
GCGATTAATTGCTGGATGGACGGATGGATTGTTACCGCGAGAGGGGGTTCTGCGATTCCA
GGAGGATATTGTGATTCCGATGATGATGATTGCTGCTGCTGCTGATTTGTAAATTCTTGA
TGCTACGACTTGTATAAGTAATGCTGCTCTCTTCTTGTCTTGTGTTCTTGAAATGTTCTT
CCTCCTTGTGAAACAAGACGGGGGATTCCTGTGCCTGTCTCCTGCGGATTGGATTGGATT
GGATTGGATTAAAAAAAAAAAAAGGTTATATTTCG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360531	1382	6e-153	1070 - 1362	100	293 / 293	CUST_29798_PI390587928	ABC42140
MLOC_18077.1	978	6e-153	326 - 618	100	293 / 293	None	ABC42140
AK251318.1	3013	1e-100	2309 - 2507	100	199 / 199	None	ABC02819 ABC02820 ABC42140
MLOC_4815.1	947	4e-80	120 - 281	100	162 / 162	None	ABC02819 ABC42140