barSeed - Barley Seed Development Database

Probe ABC39577

Source Contig ABC39577

barSeed

Links

Affymetrix Source Sequence (593 bp)

>ABC39577 593
GCGGGTTCATGGCGTCTTGGTGCCCGCAGCAGGAGGTGTTGAACAACCCGGCTGTAGGTG
TCTTCTTGACACATAGCGGTTGGAACTCGACAATGGATAGCATGTGCGGCGGCGTGCCAG
TCATCAGCTGGCCTTTCTTCTCGGACCAGCTTACCAATTGCCGGTACCAATGCAACGAGT
GGGGCGTCGGCATGGAGATCGATAGCAATGTCCAGCGGAACGCCGTCACAGGCTTTATCA
CTGAACTCATGCAAGGTGAAAGTGGGAAGAAGATGAGGAAGATGGCGGAGAAATGGCGGG
TGAAGGCAATCTTGGCGGCCAAGCCCGGCGGTTCATCTCACCGCAATTTCAACGGGCTGA
TCCATGATGTGCTCCTGCCTAGTAAGGAATAGATAGATCTTCCCATGTATACAAGACGGA
TATAATAAAAGACTTTACTAGGGGACGGGGCCGTCCCTGGGCGCCCCATGTTAGTCTTTT
CATGGGGCGTCTTCCTTCCATCCATTTTTGCACCCATGTAAGATGACATCATTACGTATT
CTTTTAATTTTGCATTTTAAAAAAAGATTTTTTTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_2849.1	1775	0.0	1 - 538	99	532 / 538	CUST_11622_PI390587928	ABC09397 ABC14823 ABC30335 ABC39299 ABC39577
AK360857	1669	0.0	1101 - 1498	97	387 / 398	CUST_11622_PI390587928	ABC09397 ABC14823 ABC30335 ABC39299 ABC39577
AK364192	1683	4e-76	1110 - 1484	81	302 / 375	None	ABC09397 ABC14823 ABC39299 ABC39577
MLOC_76480.1	1774	3e-72	1277 - 1655	80	304 / 381	None	ABC09397 ABC14823 ABC30335 ABC39577
AK357284	1911	2e-69	1330 - 1706	79	300 / 378	CUST_41200_PI390587928	ABC09397 ABC14823 ABC30335 ABC39577