barSeed - Barley Seed Development Database

Probe ABC38691

Source Contig ABC38691

barSeed

Links

Affymetrix Source Sequence (631 bp)

>ABC38691 631
GCTGCAGCAACTAGTACAACACTAGCAAAGACCGACCGATCGAGCAGCTAGCTGCTAGCA
ATAAGGAGAGTAAGAGGAAGAAGAAACATGGCGGCGGGGGGCGTGTGGGTGTTCAAGAAC
GGGGTGATGGAGCTGGAGCAGGAGGCGACGAGCCGGAAGGCGCTGATGTACGTGCCGGCG
AACGAGAGGATGCAGTCGCTGGAGGCGTTGGAGCGGCGGCTCGGGTCGCTGGGGTGGGAG
CGCTACTACGAGGACCGCGCCATCGTGCAGCTCCACAAGCGCGGCGGCGTCGACCTCATC
TCCGTTCCCCGGGACTTCTCCAGGCTCCGCTCCACCCACATGTACGACGTCGTCGTCAAG
AACCGCGACCACTTCAAGGTTGTCGACTTCTAGTTAGCCATCTTCATCGGTAATATTCTT
CATATTCTGGGCGGATAAATTCGTGGCTCTGCACCACAAATATATGTATAGACGTCATAT
ACGAATAAGCACCTACGTGTGCGATTATGCATGTGTTGTACTGTCCATGTGTGACTTAGT
ATATACCCGTGTGCCTTTGTAGGAACATGTAACCTGTGTGCTGGAAATAAAAATATACGT
ATGCGAGTACCGGGGTTTAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_71796.1	687	0.0	1 - 615	99	614 / 615	CUST_3373_PI390587928	ABC09843 ABC18182 ABC38691
AK358497	624	2e-163	16 - 394	94	357 / 379	None	ABC09843 ABC09844 ABC18182 ABC38691
MLOC_23427.1	208	7e-74	6 - 208	92	186 / 203	None	ABC18182 ABC38691
MLOC_33244.1	555	2e-59	106 - 343	85	202 / 239	CUST_35789_PI390587928	ABC09843 ABC09844 ABC38691