barSeed - Barley Seed Development Database

Probe ABC31282

Source Contig ABC31282

barSeed

Links

Affymetrix Source Sequence (534 bp)

>ABC31282 534
GCTGCATCCCGATGGTCCATGTCCAAGACGTCTGCCGCGCGATGATCTTCGTAGCCGAGG
AGGAGGCTGCTCAAGGAAGATATATCTGCAGCTGCCTCGACACCACCCTCGCGGAGCTGG
CCACCTTACTGGCCACCAAGTTCCCGCAGTACAACGTCAAGACCGACGGGTTCGGTGGTC
GCCCCGACAAGCTGAGAGTCTGCATTTCGTCGGCGAAGCTCGTTGGGGAAGGGTTCGAGT
TCAAGTACAAGCTGTTGGACGAGATATACGATGACGTCGTCAAATACGGAAGGTCCTTGG
GAATCCTTCCGTACTAGCAGTCTAGCATGTATGTGAGCCTCTATGTATGTTGGTTGGTTG
GATCTCGGAACCAAGCTGAAGTTCAAATTTGCTTATAGGAGCACTAGCAGACAGTACTGC
CCCTGTGTTTCTACAGGTCTATTTTAATCCATGCATATTCTTTTCTTTTCATATACCGAA
ATGATGAAATACATAGTCTAAACATTTGTACACGGAAGACAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60658.1	1400	0.0	65 - 534	99	467 / 470	CUST_20106_PI390587928	ABC08212 ABC08213 ABC31282
AK371087	1463	3e-161	756 - 1084	98	322 / 329	None	ABC08212 ABC08213 ABC23472 ABC31282 ABC31669
MLOC_71382.1	1559	2e-73	219 - 530	83	260 / 314	CUST_30048_PI390587928 CUST_30049_PI390587928	ABC08212 ABC08213 ABC15809 ABC31282
MLOC_71382.2	1639	2e-73	130 - 441	83	260 / 314	CUST_30049_PI390587928	ABC08212 ABC08213 ABC15809 ABC31282