barSeed - Barley Seed Development Database

Probe ABC30762

Source Contig ABC30762

barSeed

Links

Affymetrix Source Sequence (586 bp)

>ABC30762 586
CTCAGATCAGGAGCAACCTTATCAAAAAAGAAGAGCAGCAGAGCGGTGTTTAATCACTTG
TCAAGGACCCATGGCGTTTCTGCAAGGATCATCGCGCGTGACGAGGAGCATCAGCAGCCG
GAAGATGATGGAGGGGAAGAAGAGCCACGGCGGGTCGGGGTTGTGGCGACAGGCTCCGGC
GCCCGTGAGGCAACTGTTCCGAAGGGTGAGGCGCGCCGTGCTGCGCCCGAAGCGCCCTGC
CGTGAGTTTCGGGTACGACCTCAAGAGCTACTCACAAAACTTCGACGACGGCCTCGCCCA
TGTCCACCACCGCTTCATATCGATTTGACGTGCCGCCCGGCCGGACCACGGCTCGAGGCT
GGAGAGTTTGAAGCGTCGTCACCTTCTAATTTGCTCCTCTAGCTCAGCTACCAGTGTACT
GGTATTAGAAAATTACTGTTTGTACATAAATTGCTTAGTGTTAAAAGTCTGAAACTACCA
ATGAACTGACCATGTATGTGCTTCAAACTAATTTGTACAACGCCGCTGTATCTGTGTTTG
TACTATAAACGGGAGTTGGGCATTGCACATTAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_17920.1	499	0.0	1 - 483	94	453 / 483	None	ABC14203 ABC30762
AK368697	563	1e-75	18 - 325	84	260 / 311	None	ABC30762
MLOC_57602.1	997	1e-75	311 - 618	84	260 / 311	None	ABC30762
MLOC_15135.2	623	1e-55	90 - 276	88	164 / 187	None	ABC30762