barSeed - Barley Seed Development Database

Probe ABC29891

Source Contig ABC29891

barSeed

Links

Affymetrix Source Sequence (339 bp)

>ABC29891 339
GCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGACAGGGACGCACCCTCT
ACGGATTCGGCGGCTGACCTGCGCCCGCTGCTCCAGTCTCCATCGAGTAGGCTCTGCTAG
CTGCTGCGGCTGTTTCTGGTGCTGTGGTTTCGTTTCTGAATTCTGAGTGTGTGCGTGCGT
TGTTGTTCCATCTGTCCGTGTAGTTAGTGGAAGGCGATGGATCTGAATGCAGTCAGTTGG
TCAGAGTGCGTGTGTTGGTTGTCCTGCCGGTCTCTGTAGCCAGTTCCTCAGTTGCAATGG
GAGGTGATGAATATGAATGCNNAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_8461.1	499	2e-166	1 - 320	99	319 / 320	CUST_9588_PI390587928	ABC00434 ABC00499 ABC29891
AK249420.1	638	1e-88	308 - 560	90	232 / 258	CUST_15818_PI390587928 CUST_15789_PI390587928	ABC00009 ABC00020 ABC00026 ABC00030 ABC00035 ABC00037 ABC00059 ABC00117 ABC00122 ABC00131 ABC00139 ABC00140 ABC00142 ABC00153 ABC00159 ABC00160 ABC00163 ABC00172 ABC00173 ABC00174 ABC00175 ABC00180 ABC00197 ABC00202 ABC00203 ABC00234 ABC00250 ABC00316 ABC00434 ABC00488 ABC00499 ABC00500 ABC00576 ABC00659 ABC00665 ABC00695 ABC00700 ABC00724 ABC00877 ABC00980 ABC27134 ABC27412 ABC29158 ABC29891 ABC29958 ABC30671 ABC32179 ABC43349
MLOC_16047.1	437	4e-78	196 - 437	88	221 / 250	CUST_15818_PI390587928 CUST_15789_PI390587928	ABC00037 ABC00434 ABC00499 ABC29891
AK367515	560	1e-68	294 - 514	88	202 / 230	CUST_18648_PI390587928	ABC00009 ABC00020 ABC00026 ABC00030 ABC00035 ABC00037 ABC00059 ABC00117 ABC00122 ABC00131 ABC00139 ABC00140 ABC00142 ABC00153 ABC00159 ABC00160 ABC00163 ABC00172 ABC00173 ABC00174 ABC00175 ABC00180 ABC00197 ABC00202 ABC00203 ABC00234 ABC00250 ABC00316 ABC00434 ABC00488 ABC00499 ABC00500 ABC00576 ABC00659 ABC00665 ABC00695 ABC00700 ABC00724 ABC00877 ABC00980 ABC27134 ABC27412 ABC29158 ABC29891 ABC29958 ABC30671 ABC32179 ABC43349