barSeed - Barley Seed Development Database

Probe ABC25331

Source Contig ABC25331

barSeed

Links

Affymetrix Source Sequence (673 bp)

>ABC25331 673
AAGAATACCCTCGGGGCATCAATTGGACACCCTCAAGGCAGATGACCCAGCTTCTATGTA
CATTGGCAATCCTGGTCTTTGTGGACATCCAGTTTCAATGCAATGTCCTGGTCCTGCTAC
AGGTCCTCCAACCAACGGAGATCCAGAAAGGTTGCCTGAAGATGGCTTGTCTCAGATTGA
TTTTCTTTTAGGATCAATTATTGGTTTTGTGGTGGGCGCTTGGATGGTGTTTTTTGGACT
TCTCTTCATGAAGAGACGGAGGTATGCTTATTTCGGGCTACTCGACAACCTATATGACAG
GTTGTATGTCATTTCTGTTGTTACTTGGCGAAAATGGTTCGGACCACCGGTGTGAATTAA
GCAAGAACTATCAAAGATACCGCTACAAGATTAAGGGCCTGGAAAACTTATTTCTATATT
GTATCATCAAACACTTTACCATTTACTAGAACTTATTGGTGCATCGTATTGTATCTTTGT
ACCGCCGGGGGAAGTTGCGCGTGCCACAAGGTTTCGTCTCATAAAATAGATGTATCCTGC
TATGGCATGCCCATTAATGTTGTATAATACTATTCAGAACTACTTGGATTTCTCCTGCTA
TGGCATACCCATTAATGTTGTATAATACTATTCAGAACTACTGGATTTCTCCTGCTATGT
CAGACCCATTAAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358145	2900	2e-60	2739 - 2878	97	136 / 140	None	ABC25331
AK361585	3369	0.0	2724 - 3369	99	645 / 648	CUST_6211_PI390587928	ABC25331
MLOC_57961.1	3339	0.0	1 - 545	100	545 / 545	CUST_6211_PI390587928	ABC25331
MLOC_57961.2	3077	0.0	1 - 501	100	501 / 501	None	ABC25331