barSeed - Barley Seed Development Database

Probe ABC23161

Source Contig ABC23161

barSeed

Links

Affymetrix Source Sequence (742 bp)

>ABC23161 742
AAGACGGCACGGCTGCTGCTCCAGGACAACCTGCAGCTCAGGCTGGCCCTCCCCGTGGAG
TGCCGGGACAACGGGTACCGGCTGTCGTACATCTGGTCGGACGATGCAGAGGTGAGGGAG
ACGCTGGGCATCCGCGACGGCTCCGTTGGCGCGTGGAGCCGGTGCACCACGCTGGCGCAC
TTCCGGCACGACGTGCGAAGCGTAGTACCGTACCATGTCGACCTGACGCGCCGGGGCTAC
CGGGCGCTAGTGTACAACGGTGACCACGACCTGGACTTCACCTTCGTCGGCACGCAGGCA
TGGATCAGGGCGATGGGCTACCCCGTGGTTGCGCCCTGGAGGCCGTGGTACTCCAAGCAG
CAGGTCGCGGGGTTCACGACGGAGTACGCCAACAACCTCACCTACGCCACCGTCAAGGGC
GCCGGGCACACCGCGCCGGAGTACCGCCCCAAGGAGTGCCTTGACATGCTTGACAGATGG
ACATCGCCCGCCGGCAAGCTATGACTACGCTCCGTTCCAAACCACGTATTTCGTGGATGA
ATATTTCGTTTCACAAAAATCTTGCAATTGTGCTGCAAGTCAAATGGCTCGCGTGTGTGT
GTAGTATTTGAAAAAAAAATTGGCCCGTGTGTCGACATAGAAATAGTTCTTCACATATGT
GTATATAGAAAATAGCAAAATCATCATGTACTCAACGGTCAAATTTGNATGGGGTTTGAA
GTTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_66029.1	1977	0.0	1046 - 1771	99	721 / 726	CUST_6430_PI390587928	ABC09219 ABC23161
AK363226	1951	4e-136	1048 - 1511	86	398 / 465	CUST_17367_PI390587928	ABC09219 ABC23161 ABC39645
AK362092	1798	4e-136	1154 - 1617	86	398 / 465	CUST_17367_PI390587928	ABC09219 ABC23161 ABC39645
MLOC_7629.1	2237	4e-136	584 - 1047	86	398 / 465	CUST_17367_PI390587928	ABC09219 ABC23161 ABC39645