barSeed - Barley Seed Development Database

Probe ABC22636

Source Contig ABC22636

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (402 bp)

>ABC22636 402
GCGAAATTATTTAGTCAGCATAAAATTTATGCTAAGATGAGGTTCACTCTAGCACTACTC
GTGACTCTCGCCTTCATCATAGTATTATCAGATGGAAAAACACAACATTGCACAGAAACA
ACTATTGGACATTCTGGTGCCTGTTCAGCCAGTTCTTGTGAGAATGGATGCAATCAAAAG
TACAAAAACGTGTGTCGTCCGAATGATGAGTGTGTATGGAAGGCCAATTGTGTTGGAATG
GCGTGCAAGTGCAGGGTGTGCACATTTGGCTCCCTCCCCATGCAAGGCTCCAAAAAGGGG
AACAATGATGCTAACTAGTAGCACATTTAATTTTTTTTGTTATGACAACAGTTGGAATAT
TATAATATAATTATTTTTTTTTTCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_80935.1	368	6e-162	10 - 358	96	336 / 349	None	ABC22636
MLOC_63248.1	448	5e-133	25 - 394	90	333 / 370	None	ABC22636
MLOC_63247.1	561	9e-106	205 - 489	91	260 / 285	None	ABC22636