barSeed - Barley Seed Development Database

Probe ABC22558

Source Contig ABC22558

barSeed

Links

Affymetrix Source Sequence (1103 bp)

>ABC22558 1103
TGATCCCCGTCCATGGAGGCCGAGGACGACAGGCCCGCCGCCGGGTACCGGCACGGGCCG
CCATGGGTGTTCAAGGGCAGCGCATTGTACCAGCTGCATTTGGTGAAGGCGGCGACGGCG
CGGGCGTTCGTGCCCAAGGACCTGCGCCTGGTGGAGGCCTTCGGCTACACGCTCGGCGGC
ATGTTCCTCGCGCGCTACCACGACAGCCCCGCCGGCCAGTTCGACGAGCTCGTGGTGATC
GCCGGCATTGTGTGGAACCCGCCGACTTCCTGCGCGTGGGCTGCCAGGGTGCTAGTAAAC
AGCGCTGAAGCCTGCCGGCATGGACGCAAGGAAGTGGGGCTTCCAAGCCATGTCGCGGCA
TTCTCACAGACTGAAGCTTCTGCGACCAGAAATAAACCAAACAGCTTCCTCAACATGCTC
GGGATGGGTTCAGGGTTCTGCAAGCAAGAGAATTACCGCGGCATCGAGATCTCGGAGGCC
TCGGGCTCGTCTGCAAGGCATTTGTGCAACATCAGTCTGCCGCTCAACGAAGTGTCAGGA
GGATCACATAAACGGAACAAGTGGATGGGTCCGGCAATCAAAATGTCACTCCCGAGCTTC
AGCGGCCAGACAGAGGATCATCCTGACCTTCTCAAGTACTCCTGCAAAGTAGAGTGCAGG
GTGCGGCCGGTGAGTCCAGCAAAGGTCTGGAGCCCTAAAACTGCAGAACCACGGGAGTGT
TCTGACGGCAGGAGCAGCGGCGCCGGGTCTGAATCAGATTCAGACGCGCAAAGGCAGAGC
GTCATGGTCTTGCTATCGAGGCCCATCTTGGCTCTGGAGTTCAGCTCCCTGCGGATGCAC
GTCGACGCGCCGAAGATTGTCGCTCCGCACCCCAAGAAGAAGGAAGTCAGATACTCCAGC
ACCTGAATCTCATACCCAGACCATGGTTCAGAAGACAGTAGACTTTGGGCACTGTCTGTT
GTTCTTTCATTTGTTCATAGGTTGCAAGTAAGATTATGCAGCTGGACACTGTGAAACCTG
CTCGCTGAATTCATTCATAGTTTGGCATTGGTTGGTTTATATGGTGAACAAGGGATACTT
TTATCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_39693.1	525	0.0	1 - 525	100	525 / 525	None	ABC22558
MLOC_78170.1	782	0.0	1 - 476	99	475 / 476	None	ABC22558
MLOC_78170.2	879	9e-115	336 - 563	99	227 / 228	None	ABC22558
MLOC_31851.1	717	7e-66	4 - 167	95	155 / 164	None	ABC22558 ABC45189
MLOC_31851.2	326	2e-61	7 - 156	95	143 / 150	None	ABC22558