barSeed - Barley Seed Development Database

Probe ABC21667

Source Contig ABC21667

barSeed

Links

Affymetrix Source Sequence (1215 bp)

>ABC21667 1215
CGGCCACGATGGGCATGGCCCTGCATGGGAATCGTGGCTAGTGGCATGTGATATGCATGG
GTTGGTTGAGATCCAAGAGAGCCGGTCGTGCGGTCAGCTAGGGGCCCAACGGGCATGCGA
CGTGTTCCAACATTGCCAGCAAAAAAAAAGTGGTGTTTACTTCATTGTTCAACTTTAACA
CATTTATAAATACAAGTGCACTTTAGTTTACTGTATCTCTGTTGCTCAGGTTGGTTTCAG
TAATTTGGTGAAGCGGCATAAGGACCAGACGAGGCGCATTTGGGTAGCTGAGGCAACAGC
GAGCTCTACATATACTCTTTCCCATGAGATCTCAAAAAAATCGCATCTTAAGGAAGCTGC
AACACGTGCTGAGAAATGGGCTTCAAGTTCTTTTGATAAAATCCAGCAGCTAAAGGAAAG
GGTTTTATGCATAATTGGTGATAGCGGTGGCTGACGTACTATGGGATAATGAAGGCTGCT
GCTTTTGGAAGTAATGTAAGAAAATGTTCGAAGTTGTGCAGAGTTTACTCTCCACACTGG
ATGCCCATTGGTAGTGAAGCGATATCGGCGTAACAAAGATACCTATTTATTATGCTTATG
CACTTTACAGAGATTGTGAGGCAGAGCACTACAGATCAGCTGACACTTGTGGAACAAATG
CGATTACCCTCGACTGAGAAGCTCTTGTTGGATACTCAAGATGACAGCCACATGGATTGG
AATCAATATACATCAACCAGGAGACGAACATGACAGGAAAATCATGATTCAGGCTTTGAC
TGATGGTGCTCACGCCCACCTTGTTGCTGAATCTTTGGCTCCTCAGCTGGCAGCCAAGAT
TGCTTGCACCCTTCAACTTCAGCAGGTCTCCTTACGGACAATCTCTCTCGCGCATGAAGA
TGTCCGCTTCCAGGAACATCATCATCAGCAGCATAGCATGGAGATGTCGAACTGCAGTTA
GCAGCTTTTTTCAAGACACTAATCCGCAACATCATGCTGTTTATTGTATCCCCTGAAACA
GCAACGGCATTGCCCACAAAGGTGCTCATCAGGTTCTCAATTCTAGATTAGAACCTGTCC
TAGGTTGTACCCATTCAGCTCATAGCATTGGATCTTGCCCTTCTGCTTCATCCCCATAAC
TTCCAAATGGAGGGCTAATGTAATTCACACTGTACTTTGCATATAGATGAATGAATAGCT
TGCCGTCAGTTGGCG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75587.1	1064	0.0	1 - 1064	99	1057 / 1065	None	ABC21667
MLOC_75587.2	961	0.0	1 - 936	99	930 / 937	None	ABC21667
MLOC_75587.3	925	0.0	1 - 906	99	900 / 906	None	ABC21667
MLOC_75586.1	724	0.0	1 - 708	99	704 / 708	None	ABC21667
MLOC_69942.1	158	4e-59	22 - 155	98	131 / 134	None	ABC21667