barSeed - Barley Seed Development Database

Probe ABC21581

Source Contig ABC21581

barSeed

Links

Affymetrix Source Sequence (1138 bp)

>ABC21581 1138
TGTTGGGGACAATGTTCCATCAAAAGACCAGTATGATACCTGCGATGATGCTAAGGATGA
ATGCAGGAGATATGCTGCTGTTCAAACGATTCTACGCGTGGTCCTAGCATGGTTGACTGC
TGTGATATTCTATTCTGGTATGCTTTTGTTTCCAGTCTCAGTAGGTCGTGCATTGCTGAT
TGCCATCCCTCAGCTGCCAGTAGCAGGTGGATTGAAGTCCAATGACCTGTTTGCTGTTGC
TGTTGGATTTTGCATCATATCAACTATCATTGCCGCCCTTAGAGATTTATCTGCCTGCAT
GACTTCTGGGAGAACATGCCTTCTAGCTTTGAAGAGGGATCTGCTTTTCTTCATATGGAT
GGTCATCATTCCTCTCTTGATTGGTTTGCTGGCTGATTTATTACTGATATCACCCTTCGT
TGGGACTGATTTTCCAGCTCTAAACTTTTTCCGCACTTGGCTCCTGNGCCGGTTCTTTAA
GCTCTTATGGATTAACCACGTCGATGAAAGTTGGGAGGCGAAGTTTAAGCGGGCAAATGA
AGATTGTTCTGGAGAGCTCAGAGCAATGTGGTGGTTCTTTCAAGATGTGTGCATTCCTGT
CGCCATGAAGCTACTCGTTGCTCTGGCTGTTCCTTATGTTCTCGCCAAGGGCGTCTTCCC
AAGATTGGGCTACTCTGCCTCCCTGAACTCGACAGTCTACCGTTTCTCATGGTTGGGCAG
CCTTGGCATTTGCGCCTTCTACTGTCTTGGCAAGGTGTTATGCGTGCAACTCCATGATTC
TATCAGGGACGACCGCTATGCCATTGGGCGGACGTTGGAAGACGTTGGAGACGGGAGCTG
AATACTCTTTTCTGAGGGCTTTTTTGTAGCAGCTAGTTCACCTCAGACAGGGATAGGATG
AGTAATATCAACAAATCCTTGTGCAGACGGGAAGGAATATACGGGTCACATTACTGATAG
GATGGATGCAAATGAGATGGTTCCAAACAGATAAATTTCCAGCGGAACTTGGTACATATG
GGAATGGTTTTCCGTGTGGAGGGCATTTGCTGAATTCAGCATTTGTGAACATGTAAACTT
GACAAGATACTCCATACCTGTTTGTACATCACAGCTGACTAGTTCAGGTACACTTAGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10712.1	2757	0.0	1332 - 2468	99	1134 / 1137	CUST_22886_PI390587928	ABC21581
MLOC_10712.5	2638	0.0	1320 - 2453	99	1131 / 1137	CUST_22886_PI390587928	ABC21581
MLOC_10712.2	2647	0.0	1332 - 2457	99	1123 / 1126	None	ABC21581
MLOC_10712.4	3324	0.0	2119 - 3195	99	1074 / 1077	CUST_22886_PI390587928	ABC21581
MLOC_10712.3	3255	0.0	2201 - 3255	99	1053 / 1055	None	ABC21581
AK373337	4492	6e-67	3233 - 3514	83	237 / 285	CUST_5777_PI390587928 CUST_5892_PI390587928 CUST_29893_PI390587928	ABC13844 ABC17852 ABC21581 ABC41122 ABC44969
MLOC_76567.1	3126	6e-67	2557 - 2838	83	237 / 285	CUST_5892_PI390587928 CUST_29893_PI390587928	ABC21581
MLOC_76567.4	3540	6e-67	2396 - 2677	83	237 / 285	CUST_5892_PI390587928 CUST_29893_PI390587928	ABC21581