barSeed - Barley Seed Development Database

Probe ABC21235

Source Contig ABC21235

barSeed

Links

Affymetrix Source Sequence (953 bp)

>ABC21235 953
ATGGAATTAAGAATCCACTGAACAGTGTGTTTGCTCACAGCAGAATGCTTTGAAATAATG
ATGCATCATTAAGGACTACTTTGTTTGAATGAATAATTTTTCTTTGTAAGGGCCCTAGAA
AGAGGCAGAGGGTTTCACATCTTTTCGTCAAACTATCCTATTATTTGCAACTGTATGTCC
TTTGTTATGCATGTTCTTTTTCTTCTCAGCATTCCCATTTACTCTTAACTGCATTTTATG
TTGCGGAAGGTCTTACATTCACGCATTTGCTGCACTATGGCAACACAAGCATCAGTAATA
GTAATAATTACATTCGGTATATAATGTATTCATTATATATTTATTTAATCTACCATTCTA
TTTTTCCTATACACTATGTTCAGTGTAATCTGCAACATTAACCCTGTTTTTATTTGGCTT
GCAGTGACTCCTTTTATGTGAAGTGAACAAATGTCAATTGCTTCTTTCATTGCCAGTAAT
ACAGCCATCAGTGCAGTGTTCCAAATTAACTTCTGAATACAGTATATATGTTTCCGTTGT
ATGTTGATTATAATTATGGTTTTCTGAATGGCTATGGTGATTTCCGCCCCTTGGTCTCTT
TCAACATATCCTGAGGTAGACATTCACATCTCTTGGTTGATTCCATTCAACTTTGCCCAG
TTAGACAGTTAGTCGTTAAACTAGGAGGCCTTGCTCTGCAGCAAGTTACCAGTTGCGGCT
ATTTGTTGCTGGGCGTAGAGAGAAAGAAGTTTTATTCCTTATGGTACTACCTGAAGCATT
GTCCAACTTCGGTGATTCATGGTCCGGTACATCTGAACCATTCATTCAAGTAATACTCCA
AAAAAATTCTCCACTTCTAGACGATGCCCGCGTGTTGCCATGGGAACCTTGTCAAAATAT
CAAATAATAATAGGTGCTAGAAGACCAACTAAACTAATGCAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_76091.4	1991	0.0	999 - 1951	99	951 / 953	CUST_33088_PI390587928	ABC12150 ABC21235 ABC36731
MLOC_76091.2	993	0.0	430 - 959	99	528 / 530	CUST_33088_PI390587928	ABC21235
MLOC_76091.1	746	2e-96	448 - 639	100	192 / 192	None	ABC21235