barSeed - Barley Seed Development Database

Probe ABC20364

Source Contig ABC20364

barSeed

Links

Affymetrix Source Sequence (738 bp)

>ABC20364 738
AGTGTTCCTCAGCAGCCAGCCACGTCAGCACATCATGCAGAAGAACCAAGGGCCGCTGCT
GCTGCACCATCACCAGTTCCACAAAATGTCTCAAACCATACAAGAATATGGTCAGAGCTT
TCAGGTGTTACTCCCAAAAGCTTTGAAGCTAACGCAGAAAATTGTGCCCAGAAGGAGAGA
AATGGAATAGCTAACGTACTGAATGACACATCAGTGCTTCCCAATACCAATGCTCCCTGC
AAGCTACCAGTGACAGATAACGCAAACCATATGGAGCAGCCTGTGCAAATGGATCACTTT
GAAGAACCTCCTGAAGTTGTGGTTGATAACCCTCGTTCGCAGCATCACCCAAGCAACTGG
GTAGGTGCTGACGAAGACAATGATGATGAAGAAGATGAGGAGCTTTTTGTCCAAACAACA
CCTCACTACATGGACTAAGGAAGGACCGATGCCGATTCTGAATTTTGCAGGTACATTCCA
GCCAGCTGCATACTGGATGAGCTAGAAATTAGTCGAAGTGCCTTTCAATTGCTCTTAGTT
CGTGTAGGCCTGAAGCTAACAATACAAGAACATTGTTTCCCAGCACCTAATTTGTATTCA
GGTGTGGCTATTTCATTGTTGCATAATATAGAGAACATTAATGCGACTTGTTTACATTGC
ATATATGGCCTTCGCTATTTTTTTTCTTTGCAAGAGAAAGAACTTGTATTTGCATCAATA
TAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_57476.1	1651	0.0	1 - 703	99	702 / 703	CUST_36700_PI390587928 CUST_38963_PI390587928	ABC16346 ABC20364 ABC34577
MLOC_57476.2	1845	0.0	1 - 669	100	669 / 669	CUST_38963_PI390587928 CUST_36700_PI390587928	ABC16346 ABC20364 ABC34577
MLOC_57476.3	1632	2e-125	1 - 244	100	244 / 244	CUST_38963_PI390587928 CUST_36700_PI390587928	ABC16346 ABC20364 ABC34577
MLOC_57476.4	1533	1e-61	422 - 550	100	129 / 129	CUST_36700_PI390587928	ABC16346 ABC20364