barSeed - Barley Seed Development Database

Probe ABC19891

Source Contig ABC19891

barSeed

Links

Affymetrix Source Sequence (1276 bp)

>ABC19891 1276
CAGGCGAGAAGCTATCTGAATCCATTAACCAAGCAAATGAGAACTGCAAGTACTTACCTG
GTATTAAGCTTGGAACTAATGTAGTTGCTGACCCCGACTTGGAGAGTGCAGTCAAAGACG
CGGATATGCTGGTCTTTGTGACTCCCCATCAATTTGTGGAGGGTATATGTAAGAAGCTTG
TGGGCAAACTAAGACCAGGAGTTGAGGCTATATCCCTCATCAAGGGCATGGAGGTCAAGA
TGGAAGGACCATGCATGATATCAAAACTAATTACCGATACACTTGGAATCAATTGTTGCG
TCCTCATGGGTGCTAACATTGCAAATGAGATCGCTGTTGAGAAGTTCAGTGAAGCAACAA
TTGGATATAGGAAAGATAAAGAAGCAGCAAACCGATGGGCTAAACTTTTCACAACTCCTT
ACTTCCTAGTTTCTGTTGTGGAAGATATTGAGGGAGTTGAACTATGTGGGACACTGAAAA
ATGTTGTGGCCATTGCAGCAGGACTTGTTGATGGCTTGGATATGGGAAACAACACCAAGG
CTGCAATAATGCGGATTGGTTTGCGGGAAATGCGTGCTTTCTCTAAACTTCTGTTCCCTT
CAGTCAGAGACAACACTTTCTTTGAGAGCTGCGGTGTGGCTGACCTTATAACTACGTGCC
TTGGTGGGAGAAACAGGAGAGTGGCAGAAGCCTTTGCAAGAAATGGTGGCAAAAGGTCTT
TTGATGAGCTAGAGGCAGAAATGTTGCATGGACAAAAACTCCAGGGGGTATCCACAGCAA
GAGAAGTCTATGAAGTGTTGACTTATCACGGATGGCAGGAACTATTTCCGCTTTTGTCAA
CTGTACATGAGATCTGTATTGGACAACTGCCACCTACATCAATAGTTGAATACAGGCTCC
GCTGAAGGTCACTCTTGAAGATGCCATCAAGAACAATTCAGGCTTCATAAAGTTTTCGAA
GACCAAGCACTCCATTACCTTCCAATTCCCGGCAAAGCAAGGCCCGGGAAGTTCTAGATG
CTAGATGCTAGCTCATTTCTGTTTATTCATTTGTGGCATCATCTGTCACATCTTACATAT
GTGCTGGCTTCAGCAAAACCAAACAAGGAGTCATCACCTGTTTGTAATAGTTTATAAACC
ATGCTCTTTGGAATTAGTGATGTGCCTTTGTTTTGCTCGGCTGTTAAATGTTTTTTAAGA
GGTAACGTTTGCATCAGCAGTCATGGCTGGGAATCTTTCCCTGCATGCTGGTTCCTCTCA
AAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_59532.15	1719	0.0	521 - 1719	100	1199 / 1199	None	ABC19891
MLOC_59532.9	3687	0.0	2635 - 3687	100	1053 / 1053	None	ABC19891
MLOC_59532.6	4080	0.0	3119 - 4080	100	962 / 962	None	ABC19891
MLOC_59532.14	1741	0.0	524 - 1418	100	895 / 895	None	ABC19891
MLOC_59532.8	3582	0.0	2635 - 3529	100	895 / 895	None	ABC19891
MLOC_59532.5	4269	3e-120	3849 - 4083	100	235 / 235	None	ABC19891
MLOC_59532.7	3640	3e-120	3370 - 3604	100	235 / 235	None	ABC19891
MLOC_59532.11	2244	2e-91	2062 - 2244	100	183 / 183	None	ABC19891
MLOC_59532.10	3981	0.0	3414 - 3981	100	568 / 568	None	ABC19891
MLOC_59532.13	1712	2e-146	1431 - 1712	100	282 / 282	None	ABC19891
MLOC_59532.12	1633	1e-103	1429 - 1633	100	205 / 205	None	ABC19891
MLOC_59532.4	4188	0.0	3722 - 4188	100	467 / 467	None	ABC19891
MLOC_59532.2	4230	0.0	3863 - 4230	100	368 / 368	None	ABC19891
MLOC_59532.3	4116	0.0	3749 - 4116	100	368 / 368	None	ABC19891
MLOC_59532.16	384	0.0	1 - 384	99	382 / 384	None	ABC19891