barSeed - Barley Seed Development Database

Probe ABC18779

Source Contig ABC18779

barSeed

Links

Affymetrix Source Sequence (706 bp)

>ABC18779 706
CGCCACTCCCTCGACTCCTTCGGCCTCACCCCGCAGCCATGAATCCGGCTCGTCTGTTCC
CAACCCCAGTGGACCCCGGTGTGCTCCTTCGCCGCGCGCACGAGCTCAAGGAGGATGGAA
AACCGCCTGTTCTAGTCGCGCGACTACGCCGGCGCGCTGCGGCAGTACGAGCTCGCCCTC
CGCCTTGCCCCGCGTGGCCATCCCTCGCGCTCCAGGCCGTGCCCGCGCGCTTGAGGCACT
CGGCCGCCACGAGGCTAGGTGGGGCTGCGTGCGGACGGTGCTCCAGGCATTGGCGCGGTG
CGGTTGGCGGCAGCGGAGCGCACGAGGCAGCGAGGTCGCTGGAGGGTGCGGCGGCGAGGT
CGCCAGGCGGAGTAGAGGGACCACGAGGCGGCGAGGTCGCCAGGCGCACGAGGCAGCGAG
GCAGTGGCAGCGCGGGGTGGCCAGGAGTCCGAGTGGCCGGCGACGGACAGAACAATTTGA
GGGGCTTTTTGAAAATTTCCAACGATGTTTGACCGGTCAACTCAACAGAATACGGAGCTA
TACGACGAGGAGTGACCGTATAAGCACCACAACTCGTATTCAATGACTGTATTGAGCGTA
TTTTGAAGTCGAGTGACCGTATTGTGCTTCGGCCTTAACTTTAATGATTGTTAGTGTATT
TTCTTTTTTTGAAAGGTGTTAGCTTTTTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376766	1080	0.0	391 - 1078	99	684 / 688	CUST_21892_PI390587928	ABC18779
MLOC_285.1	960	0.0	1 - 565	100	565 / 565	None	ABC18779
MLOC_50265.1	237	9e-88	9 - 234	93	211 / 228	None	ABC18779
AK359905	1207	4e-86	449 - 674	92	210 / 228	CUST_29223_PI390587928 CUST_22434_PI390587928	ABC18779 ABC29483
MLOC_29768.3	1281	4e-86	106 - 499	82	350 / 429	None	ABC18779
MLOC_29768.2	1471	4e-86	106 - 499	82	350 / 429	None	ABC18779
MLOC_29768.1	734	4e-86	106 - 499	82	350 / 429	None	ABC18779
MLOC_29768.5	1203	4e-86	100 - 493	82	350 / 429	None	ABC18779
MLOC_29768.6	1332	4e-86	100 - 493	82	350 / 429	None	ABC18779
MLOC_29768.7	1373	4e-86	100 - 493	82	350 / 429	None	ABC18779
MLOC_29768.4	1302	4e-86	105 - 498	82	350 / 429	None	ABC18779
MLOC_29768.8	1020	1e-82	1 - 258	88	230 / 260	None	ABC18779
AK360020	1957	2e-54	182 - 321	94	133 / 141	None	ABC17329 ABC18779