barSeed - Barley Seed Development Database

Probe ABC17977

Source Contig ABC17977

barSeed

Links

Affymetrix Source Sequence (657 bp)

>ABC17977 657
GGGCTGCAGGAATTCTTCACGAGGCAGATATGACGGAAGTTGCCAATTCGTCTTGCTCTG
GAGATGGTGGCCAATCCATCACTAAGAGGAAGAGATTGAGGGAGGCACTCCTACGGCACA
ATTCATACGAGGACCTTTATGAGATCTGCCGTGGGGCCCATTGGATATTCCCAAGATACA
CAGTAGTACCTTCAGTATCAGATGGAATGTACCACGCCAGCGTACGTTTGAGATGCCCTG
ATTTTGAGATGAGCATCACTGGTGGTCTTCGTCCTACCCCACACGAGGCGAAGTGCTCTG
CAGCTGCCAATATGATACTGGAGCTTCACAGGAAGGCGGAGCAAGAACAGTAGGGTACCT
GACGCAAAACCACCTTGTTAAACTCCAGAATCCGGGAAATTGCAGGTAGCTGGAACCAGT
TGTTTAGTCATTGCAACTTTGAATAAGAATTCTTGAGATACCTAATCGTGTTGGTACCTT
GTTTAGCTATTTACCTTCCGGAGGTTGACTCCTTGTGTTGTTGTTGGTATTATGGCTGAT
TACTAAGGTCGTGATAAATCCCAGACTGTTATTTCAAAATTCTGTGACGCTTCGGTTGCG
CTGTCTGTTTCATCATGTGAGTGAGCACAAATTTTCTAGTTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_6725.2	2837	0.0	1 - 609	100	609 / 609	None	ABC17977
MLOC_6725.3	2132	0.0	1 - 595	100	595 / 595	None	ABC17977
MLOC_6725.1	2795	0.0	53 - 646	100	594 / 594	None	ABC17977
MLOC_6725.4	1866	0.0	1 - 562	100	562 / 562	None	ABC17977
MLOC_29166.1	2488	6e-164	32 - 649	84	525 / 625	None	ABC17977
MLOC_29166.2	2955	6e-164	3 - 620	84	525 / 625	None	ABC17977
MLOC_29166.3	2370	8e-163	11 - 605	85	509 / 602	None	ABC17977
MLOC_29166.4	2256	8e-163	9 - 603	85	509 / 602	None	ABC17977
MLOC_29166.5	2293	8e-163	9 - 603	85	509 / 602	None	ABC17977
MLOC_29166.6	2250	8e-163	9 - 603	85	509 / 602	None	ABC17977
MLOC_29166.7	2219	3e-162	5 - 577	85	494 / 580	None	ABC17977
MLOC_29166.9	2368	6e-159	1 - 567	85	488 / 574	None	ABC17977
MLOC_29166.8	1661	6e-159	1 - 567	85	488 / 574	None	ABC17977
MLOC_29166.10	1452	5e-140	4 - 511	85	437 / 515	None	ABC17977