- Probe ABC17787
- Source Contig ABC17787
Affymetrix Source Sequence (1163 bp)
>ABC17787 1163 GCTGGCTCTCCCCTCTCCTTGCCCCGAAGTCACCGCCGCCGCCACTGCCCACGCTGGGCG CTTCCGACGACCTACGGCGGCACGCAGTACGCTCCCGAGCTCCCCACGGTCTGCTCGTCC CTCTCCTCCGGACAGATTTTGGCTCCCATCCTGAACCGCCCGGTCGGAACCACCCCGTGG CTAGGGTTTCGGGCAGGGCTGCGCCGGCGCATCTCCAGCGGCCCTAGGAGCAGGATCTGT TGTACAATTAGAGTCTGCAGTTTGCTTTCCAGGAGTAGGAGATGGATCTCTGTTCCTGTG TTTGGGCAAAAGAAAATTCTGAATTTGGCAACAAAAGTATGGAGTTCTCTGGATCATCAG GATCATTCATATACACACCTGAAACTCAAAGCGAGATAGCCACAGTTATTCAGGGGGTTT TGCTTGGTATTTTTCTACTTCCCTTGCTGTACAAAAGTTCTCTTCGAGTTTGGGTTTACT GTCGAACATTGGGCAAGCAACAACCAGAAGCAAATGAGAAACGAGCAGAAAAAAGAGCAG GTTTCCGTCATGGATTTATCTTCTTTTGATGATTCGGCGACAATTTGCTTCCGTCTTCTT GTGAATTCTTCGTTACGTTCATGTATCAATGTTTGCCTTTTTCCTCCCGCGACACGATTC CTGTGTTTTGTAGTTAATTTGGAGCTTCTAACTTCCTCTTCGGTTGCGACATATTCAGGG TTCTCCATTGCAATTGAATCCTTTGATGGTGTATTGCGTTTCAATTGGCGACGAACTTCA ATTTGTTCTATTCTTGCTTTCTTCCGTTCTGGTTGCATGTTTTCGTATTTTTTCTTTTCT TGTGCGCGTTGTGTCGCCTTTTGTTCTGGTGTCTTTCCTGAATATTTCTTTTGATGATAG GCTTCGCGCCTTTTTTTTCAGTTTGTCCTTGCTTCCTCGGTCATCCGTTCATTCCGCTCT TTATTTTTCCTTTTTATTTTTTCCTTTGACTCCTGCCTTTCTTCATTTGTCATCCGTGCA TACCGATCTCTATCTCTCTTTCTTTTTTGTTCTTTGGCTGCATCCATTTGCTCCAAATAA GTTTCCTGTATGAGATTTTGTATAATGTAAGAATTCCAAATTAATGATATAATAGATTTA ATCTGTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_46134.1 | 1112 | 0.0 | 422 - 1035 | 98 | 600 / 615 | None | ABC17787 |
| MLOC_9317.4 | 1481 | 0.0 | 808 - 1336 | 96 | 509 / 529 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_9317.6 | 1312 | 0.0 | 794 - 1312 | 96 | 499 / 519 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_9317.5 | 1812 | 1e-93 | 808 - 1012 | 97 | 199 / 205 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_9317.7 | 1645 | 1e-93 | 787 - 991 | 97 | 199 / 205 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_33103.1 | 640 | 2e-156 | 309 - 640 | 97 | 324 / 335 | None | ABC17787 |
| MLOC_9317.2 | 1473 | 2e-86 | 1178 - 1391 | 94 | 201 / 214 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_33103.2 | 553 | 3e-154 | 226 - 553 | 97 | 320 / 331 | None | ABC17787 |
| MLOC_9317.8 | 1857 | 4e-78 | 1137 - 1322 | 95 | 178 / 187 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_9317.1 | 1804 | 2e-86 | 1509 - 1722 | 94 | 201 / 214 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_25430.1 | 239 | 2e-122 | 1 - 239 | 100 | 239 / 239 | None | ABC17787 |
| AK377127 | 1523 | 2e-86 | 68 - 281 | 94 | 201 / 214 | CUST_2816_PI390587928 | ABC11460 ABC17787 |
| MLOC_28998.1 | 688 | 1e-103 | 258 - 462 | 100 | 205 / 205 | CUST_23270_PI390587928 | ABC17787 |
| MLOC_9095.1 | 201 | 4e-98 | 4 - 201 | 99 | 197 / 198 | None | ABC17787 |
| MLOC_9317.3 | 1487 | 4e-78 | 1158 - 1343 | 95 | 178 / 187 | CUST_23270_PI390587928 | ABC17787 |
| AK364603 | 2174 | 3e-79 | 816 - 1024 | 92 | 196 / 212 | CUST_26839_PI390587928 | ABC17787 |
| MLOC_14307.1 | 1607 | 3e-79 | 600 - 808 | 92 | 196 / 212 | None | ABC17787 |
| MLOC_14307.4 | 1971 | 3e-79 | 562 - 770 | 92 | 196 / 212 | CUST_26839_PI390587928 | ABC17787 |
| MLOC_14307.3 | 1807 | 3e-79 | 545 - 753 | 92 | 196 / 212 | CUST_26839_PI390587928 | ABC17787 |
| MLOC_81926.1 | 243 | 8e-71 | 1 - 164 | 96 | 158 / 164 | None | ABC17787 |