barSeed - Barley Seed Development Database

Probe ABC17753

Source Contig ABC17753

barSeed

Links

Affymetrix Source Sequence (666 bp)

>ABC17753 666
GTTTAAACAGATCGGACGCTGCCTTAACAGTGCCCATTTTCAGGTTGCTGAGCGGGCTTT
GTTCTTATGGAACAATGATCACATTGTAAGCTTGATTGCCCAAAATCGTGGTGTCATACT
TCCAATAATATTTGAAGCACTTGAGAGGAACATACAGAGCCACTGGAACCAAGCTGTTAA
TGGCCTGACCGCAAATGTGCGTAAGATGTTTTTGGACATGGATAGTGAGCTATTTGAAGA
GTGCCAGCAGCAGTACATTGAGAAAGTAGCAAAAGCCAAAGAATTGGAGGAGCAACGGGA
GTCGGCATGGAGACAATTGGAAGCCGTTGCTGCCAAGGCTTCTGGGGATGACATGGTTTT
GGTCAACTAGGTAATATATTTGTCCCGCTTCATTTCTTTGTTAGTGGTTGCGTCACTAAG
CTATTTTTTTTAGTCTTGTAAGTTATAACTGTGTCACTGCTGGTAATGCCTCTCCCCGTT
ATGTCTTTTCTCTTTGTTTTTAAGCATTCCTATGAGATGCATTACCACCTTCTGTACTGC
TGAGTCTTTGTTTTTAATTTGGTCATGGCAGTCCACAAAGAGATGGAGTATGTTTGTGTA
TCGAACTTGCAATTGTTCATGGACAATTTTTACATTAGTAATTTCAAGCAAAAAAAAAAA
AAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372999	2004	0.0	1402 - 2004	99	602 / 603	CUST_25683_PI390587928	ABC17753
MLOC_4514.6	1687	0.0	1 - 578	100	578 / 578	None	ABC17753
MLOC_4514.7	2845	0.0	1 - 545	100	545 / 545	None	ABC17753
MLOC_4514.8	718	0.0	1 - 347	100	347 / 347	None	ABC17753
MLOC_4514.1	1983	2e-173	545 - 874	100	330 / 330	CUST_28483_PI390587928	ABC17753
MLOC_4514.5	2221	2e-173	445 - 774	100	330 / 330	None	ABC17753
MLOC_4514.4	1193	3e-172	495 - 822	100	328 / 328	None	ABC17753
MLOC_4514.2	3143	1e-171	517 - 843	100	327 / 327	None	ABC17753
MLOC_4514.3	3093	1e-171	467 - 793	100	327 / 327	None	ABC17753