barSeed - Barley Seed Development Database

Probe ABC17644

Source Contig ABC17644

barSeed

Links

Affymetrix Source Sequence (1016 bp)

>ABC17644 1016
AGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTGGACCCGGCGATGGGC
AGCCCGGTGCTGGTCGCCGGCGGCGAGGCCGTCGTCCCCGCCGTCGCTGAGGCCGTCGCC
GTGGCGCGGGAGCGCGGCATCTTCGTCGTCTGGGTTGTCAGAGAGCATGACCCTTCTGGA
AGAGATGTTGAACTTTTTCGCAGACACTTGTACTCTGGAGGAAAGGGTCCAACAGTGAAA
GGTTTGAAAGGTGCAGAGCTGGCTGATGGGCTTTTTATCAAAGAAGGCGACTACAAGTTA
GTGAAGACAAGATTTAGTGCTTTCTTTGCGACACACCTTGATTCCGTTCTTAAGACACAA
GGAATAAAGAACTTGGTAATTGTTGGTGTCCAAACTCCAAATTGCATCCGGCAGACTGTC
TACGATGCTGTGGAATTGGACTATGAGAAAGTTATGGTCCTTATTGATGCAACAGCTGCT
GCTAGGCCAGATATCCATTTGGGTGAGCACTCTTCTTTCGCGCTAGCCCTTCTATTTTAC
TCTCCACGTCAAATACGTATGAAGCTGGCTCTGGGTGATTCCTTATGCATATGTTTAAAC
TAATGTTGACATGATAATTGATATTAAACAGGAAAAGCTTGAAAGTTAATTTCCGTGTTA
ATAAAATTCACCTTTTATGACCCTTTGTTTCCTCTCATGGGCATGCACTAAGAGGTACAC
TCAGTTGAAGGTATAATCTGTATCGCAGCTTTGTGAAATTGGTTTTCCTACTGCATAGGT
ACGCTTTGTTTAAGTGGCATAATTTAACTACTTTATTACCAGAACACGCTCAAAGTGTGG
GTCTGCATCAGTACACAATTTACTAAATGTAAATCTTGAGTTGTTTCTACAAACGTAAGC
TGAATATTTTGTTTACGCATAAAAACATTAGAAATTTGAAAAATATGGAATTTTACTCAT
GCCGCATCCAAATTCATGACTCTTGTCTTGATGACATCATGCATGTATACATTATG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_1491.2	869	0.0	1 - 810	100	810 / 810	None	ABC17644
AK357201	1040	0.0	157 - 658	100	502 / 502	None	ABC17644
MLOC_1491.1	867	0.0	383 - 855	100	473 / 473	None	ABC17644
AK364479	1679	2e-61	400 - 555	94	147 / 156	CUST_7280_PI390587928	ABC01985 ABC01988 ABC17644
MLOC_46923.1	172	2e-60	19 - 172	94	145 / 154	None	ABC17644
AK364196	2522	3e-59	578 - 732	94	145 / 155	None	ABC01985 ABC01988 ABC17644