barSeed - Barley Seed Development Database

Probe ABC17554

Source Contig ABC17554

barSeed

Links

Affymetrix Source Sequence (1205 bp)

>ABC17554 1205
GAAGAAAGATCCAGCAGAAGGCAACAACCGCCAAAGATTGAAGGAGAGTGGATCCGGCTC
CCGGCGAAATGGCTGCACCGCTGCCGCCTCCGCCATCGCTGGAGCCGGAGATCGGCCCTG
ACGGCCTCGCCAGAGACTCCCCCGTCCTGGCCTACACCGAGAAGGTCATTGCGGAGGAGC
AGCTGCAACTGAAGAAATATATTAAGGAAAATTATTCCAAAATTCGGGATGTTGAGAAGG
AGCTTGAGAATCTGACTCTAGAAGTTAAACTGACAGCTGGACCAAAGAAAGCAGCACTCG
AGCATTTGAGGAAAAAGATTGAGATTTCAACTGAGAGAATACGTTTGGCTAAGGTGAAAG
AGGACGATGCAAAAAAGGCCTGGGAAGCTGCTGCGCAAGTTGTTAAAGAGGAAGAGGAGG
CTAAACAGAGGCTATGTGACGACCTTAACCGGTTGGTTCAAGAGAGTGCGGCTTCACAAT
ATTCGAGGTTAGAAGAATTAAAAAGGCGTTTAGAATGTCTAAATCCCATCAGGGCTTCTG
TTGATGTTTCTGGTATCAACACTGTACAGCATGCTACCACTAATTCGGTACGGCAGCAAC
CCACATCACAAAATCTAGCGAATGCAATCTCCCCTGCAAGCAATGTCCATGAGCCCGCCA
CCAGCGGAACACAGCAACAACCTGCCAAGGCGGAAATGAAGCAGGGATCATCAAACTCGG
GAGGAAGAGGGAGAGGCGGTGTGATGGTCCTCCCCAAGGGAAGGGGAAGCTCTGGATCAG
GATGGACAGGTGCTGGATTTGAAACATGATGCTGGGATCTGTAGTTATATACTTGAAAGA
ATTGGCATGGTTGTGTTGGTATAAAACGATTGCTTGGTTGGAACTGGAATGTTGAAAGTG
TATATATTTTGTGCAACAATAGAACATGTTATTCTTGAGAGATGTAAGTTGTAAACACCA
TTATTAGTAATGGAGTAGATATGCTGCTAATACAGTCCTCTTATTATGGTTAACGGAGTA
GATATGTCAGGAGTCTTTGATTTGCCTCTACAATGAATGGCTATGAAGGAGATTTTCACA
TTACTTGAGGAAATCATTCCTTTGTATGGCAACATCCAGATGGAGATGTAGCCTAGTGAT
CGTATGATACCTGTGAATCTGTGATGGCGATGTGATTATTTGACGGTTCAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249344.1	1006	0.0	19 - 1006	100	988 / 988	None	ABC17554
MLOC_69853.1	1963	0.0	1114 - 1963	100	850 / 850	None	ABC17554
MLOC_69853.4	919	0.0	111 - 919	100	809 / 809	None	ABC17554
MLOC_69853.3	839	0.0	43 - 839	100	797 / 797	None	ABC17554
MLOC_69853.2	952	0.0	168 - 952	100	785 / 785	None	ABC17554
MLOC_3467.2	439	1e-98	60 - 255	100	196 / 196	None	ABC17554
MLOC_3467.1	246	4e-98	52 - 246	100	195 / 195	None	ABC17554