barSeed - Barley Seed Development Database

Probe ABC17102

Source Contig ABC17102

barSeed

Links

Affymetrix Source Sequence (1069 bp)

>ABC17102 1069
GGCACGGGCTAGNGCTCANCTACGACGCAGNACAGACTGACACCGCGCTTGACAAGTACG
TGCCCTTCATCATGTCCACAGCGGAGGAGCTGCGACGGCAGGACCGCGCGCTCAAGATCT
TCATGAACGACTACGGCTATGGGTCGTGGCAAGGCATCAATCACCACCACCCGGCCTCGT
TCGAAACGCTCGCCATGGATCCAGGGCTGAAGCAGGCTGTCCTGGACGACCTCGACCGGT
TCCTGAAGAGGAAAGAGTACTACCAGCGAATCGGGAAGGCTTGGAAACGCGGCTACCTGC
TCTACGGCCCCCCTGGCACCGGCAAGTCCAGCCTGGTCGCTGCCATGGCCAACTACCTAC
GTTTCAATCTCTACGACCTCGATCTCTCGAGTGTGCACGACAACTCATCACTGCAGAGGC
TTCTCATCGACATGTCCAACAAGTCCATCCTTGTCATCGAAGATATTGACTGCAGTTTCG
ACACGATGTCGAGAGAGGATCGCAAGGACCACTCCTTGGAGGACGAGGACGACGGCCGAG
ACTACCGTACGGGAGGTGAGCGCAAGATAACACTGTCGGGGCTGCTCAACTTCATCGACG
GGTTGTGGTCGACTAGCGGCGAGGAGCGCATCATGATCTTCACGACCAACTATAAGGATC
GCCTTGATCCGGCGCTGCTGCGGCCGGGGCGCATGGACATGCATGTATATATGGGTTACT
GCTGCTGGGAGGCATTCAGGAAGCTGGCCTGGAACTATCACCTCATTGACGGCCACCCTC
TGTTCCCAGGGATACAGGAACTACTTGCGGTGGTGGAGGTAACGCCCGCCGAGGTGTCTG
AGATGCTGCTACGGAGCGAGGACGCCGATGTTGCGCTACAGGTACTGATGGAATTCCTCC
AAGAACGGAGTGGGGCAGTAAAAGAGCCGGAGGACAAGCACGATGCGTAGCATGGTAGTA
GCAGAGAAGAGACATGGTCTGTGTGTTCAGAGAAAACAAGGACAAATGCAGAGAGCCTTT
TTGAAGGGGGTGTTGTAAGAACATTTCCAACCAATTAAGAAAACCGTAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_7137.1	1856	0.0	600 - 1660	99	1056 / 1061	CUST_12959_PI390587928	ABC17102 ABC26328
MLOC_15701.1	2478	1e-102	1471 - 1805	87	291 / 335	CUST_30810_PI390587928 CUST_37567_PI390587928	ABC17102 ABC26328 ABC47779
MLOC_34513.1	2231	1e-78	325 - 664	82	281 / 341	CUST_36650_PI390587928 CUST_26764_PI390587928	ABC17102 ABC26328
MLOC_34513.2	1863	1e-78	296 - 635	82	281 / 341	CUST_36650_PI390587928 CUST_26764_PI390587928	ABC17102 ABC26328