barSeed - Barley Seed Development Database

Probe ABC16494

Source Contig ABC16494

barSeed

Links

Affymetrix Source Sequence (702 bp)

>ABC16494 702
AGTGAGAACACAAGACACAAACCAGTCATACTCGGAAATCACTTCAGATGACTACCTTGC
ATATATTAGTAACTATGTTGTCGGCCTCGGTCCGTGGAAAGATACTATTGTTCCAGTTGC
AAAAAACTATATGCTGGAACCAACTGATCTTGTTGCAAGAGCGCATGCTCATAATCTGCA
GGTACACCCTTACACATACAGGAACGAGAACCAGTTTCTGCACTTCAACTTCCATCAGGA
TCCCTATGCCGAGTACGATTTCTGGATAAATACGGTGGGGGTTGACGGATTATTCACAGA
TTTCGCTGGAAGCGTACACCAGTACCAAGAACTGAAAACCCCACACCCGAAGGACGCAAC
CGCGAGCAGCCTCCTACTAAAAATTGCTCAGATGATCGCAGCATACGAAGGCCGCTGAAT
AAGTTTGTGTTCCAGCAAAGTCACTGCCATTTTCAGTGATTAATGCGCAAGACCAAAATG
GGTCGACATTTGATGATCCGCAGTGACCTTGAAAGGTCACTAATAGATGTTGGTTTACGC
TGTTATATAGTGTTAACACGAGTTTATGTATGCCTATTCATTAACCCCCCGAATCTCGAG
GGGGAGATATATATTACCGCAGCAAACATTTTTTTTCCCGAAACGTTTCCAGACGAAACT
GTAACAGTTGGTGTATAGCTCATCCAATGGCATATAGTTTCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_56555.2	2336	0.0	673 - 1374	100	702 / 702	CUST_19185_PI390587928 CUST_1465_PI390587928 CUST_1748_PI390587928	ABC15587 ABC16494 ABC33445
MLOC_56555.1	1915	0.0	673 - 1374	100	702 / 702	CUST_1748_PI390587928 CUST_19185_PI390587928	ABC16494 ABC33445
AK250115.1	1673	0.0	966 - 1667	99	701 / 702	CUST_1748_PI390587928	ABC16494 ABC33445
MLOC_56555.3	1797	1e-91	662 - 844	100	183 / 183	CUST_1748_PI390587928	ABC16494 ABC33445