barSeed - Barley Seed Development Database

Probe ABC16177

Source Contig ABC16177

barSeed

Links

Affymetrix Source Sequence (655 bp)

>ABC16177 655
GCCCAAGACGCTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGGCTGGTGCCGGA
GTACCGGCCGGCGGCGAGCCCGACGTTCGTGCCGTCCAAGCACTCCAACTCGCACCGCAA
GGTGGTGGAGCTGCGGCGCCAGAAGGACGCTCCGCCGACGCAGCATCAGCTCCTGCACCA
GCAGCCGCAGCAGCACCAGCTTGGGCAGGGCCTGGGGTTCCACGTGCCGAGCCCGCTGCT
GTTCGACGGGCCGGCGGCGCCGCACCTGGGCGGCGGCGCGGAAGAGTTCCTCATCCGCAA
CCGCATAGGCCCCGACCACCGGCAGCTCATCTAGCTTAGCTAGCTAGCTAGCGCGGCCCG
CCTAGGAGGAGGAGGATCGTTTCCTTAGACCAGCAGCAATAATTCAGCAAGAAGAAGAGC
CAGCGGCAGTGCCCAGCCGAAACTTTTTTCTAGGAGTTGTTGTTTCTCCGGATTTTAATT
TACCTTTTTTTTCCTGAGACCTGTATGCTTGCTTGCTTGCTACACTCTCCGTGCTTCTCA
GCTCTCGAGTTCCTTAGAAACTAATCCTAGGGTGGAGTTTGTTTTCCTTCCTTCTCTCTT
TTTTCCATAGCCTTCTTTTCTTTTTGCCCTTGCATAGATTTTTTTTTTCATCTTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361411	1806	0.0	993 - 1647	100	655 / 655	CUST_39419_PI390587928 CUST_16505_PI390587928	ABC02157 ABC13200 ABC16177
MLOC_75188.1	1223	0.0	339 - 993	99	654 / 655	CUST_39419_PI390587928	ABC02157 ABC13200 ABC16177
AK376768	1616	0.0	1078 - 1616	100	539 / 539	CUST_16505_PI390587928	ABC02157 ABC13200 ABC16177
AK365841	2431	1e-51	1920 - 2069	91	138 / 151	CUST_37457_PI390587928 CUST_37561_PI390587928	ABC02157 ABC02455 ABC13200 ABC16177