barSeed - Barley Seed Development Database

Probe ABC16050

Source Contig ABC16050

barSeed

Links

Affymetrix Source Sequence (1123 bp)

>ABC16050 1123
GTCTTCTTCCTAGCGCCTTACCCGGAGGACGTTGGCTTCGCTTCGTTGCCCCCCAACCCC
AAGCACGCCGGTGGAGCGAGCACCGACGAGGAGGACAGCAGCACCAGCACGGGTGGGGAA
GAGGACAGGAGGGATGCCGTAGGGATTTGGAAGGCATTTTCTATCCCGGGTGTGCTCACC
TTCGCGGTCTGCCTCTTCTTTGCCAAGCTGGTCGCCTACACCTTCTTGTACTGGCTCCCG
TTCTACTTGACCCAAACTGCCATTGGAGGAGAGTACATGTCGGTCACGGATGCTGGTTAT
CTATCAGTTTTGTTCGATGTAGGAGGAATCATTGGTGGAATTCTCGCTGGGTTCATGTCT
GATCAGCTCGATGCTAGGGCCACTACTGCAGCAATGTTTATGTATCTGGCGATTCCAACA
CTTTACGCCTTTCACGCGTATGGCAGTACTTCGAAAGTGACAAACATTGCCCTGATGATG
ATCAGTGGCTTGTTTGTTAATGGACCTTATGCTCTGATAACAACTGCAGTTTCTGCTGAT
TTGGGGACTCACAAATCTCTCAAAGGAGATTCCCGTGCGTTGGCCACTGTCACAGCAATC
ATAGACGGGACAGGATCGCTTGGTGCTGCCTTAGGGCCATTTGTGACAGGCTTCATTTCA
AAAACTGGATGGGATTCAGTGTTCATAATGCTTATACTTTGTGCATTGATTGCTGGAGCG
TGTTTATCAGGTCTTGTGAAATCAGAGATTCTGCAGATTATTCAAAACTGGAGGAATAGA
TCAAGTAACACGCCGTATGGAACTGCAGATACTGGCGCTCAACCACTTTTAGGGGAGAGT
AGTTGAAGGCAAGGCAGTTTTTGGCGCAGGTGGGGTGGGAATGCGGTATACATTTTTGTA
ATGTTGTCATAGTTGGGAAGTGCTTTCAGTATGCTGCTGCCGAAGATGACGTCGAGCAAA
TATGGTTGAGATAGCATATGTTGCCTTCTCTTTGTCACAGAATAGTATATTGTATATACA
CCTCCTGCAACATCTTGTAATGTATCAATGTACTGTAGGATCCCTATCTTTTCTCATAGA
TGAACATGAAAGAGTCAAATGCCTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_81672.2	1401	0.0	1 - 1091	99	1089 / 1091	CUST_24937_PI390587928	ABC16050
MLOC_81672.1	1015	0.0	1 - 834	99	833 / 834	None	ABC16050
MLOC_81672.3	596	2e-131	29 - 286	99	257 / 258	CUST_24937_PI390587928	ABC16050