barSeed - Barley Seed Development Database

Probe ABC15553

Source Contig ABC15553

barSeed

Links

Affymetrix Source Sequence (610 bp)

>ABC15553 610
CGCGTGCGGCCATGGGGCGGACTGCGGCGCCATCCAGCCAGGGAAGCCCTGTTACGAGCC
CAACACCAAGCTCGCGCACGCGTCTTACGCCTTCAACGACTACTACCAGAAGAACGGCCG
GGCCAGCAGCGCCTGCGACTTCGGCGGTGCCGGCACCATTGTCAACCAGGCACCATCAGG
CCGCTGCGACGCGAGCTCGAGCTGGTGCGTGGCGAACTCGGCGGTGGGTGCCGAGCGGCT
GCAGAGGGCGCTGGACTACGCATGTGGCCACGGCGCGGACTGCACGGACATCCAACCTGG
AGCACGGTGCTTCAATCCTGACACCAAGGTCGCGCATGCGTCCTTCGCGTTCAACGACTA
TTACCAGCGCCATGGTCGGGCCGCCGGAACGTGCGATTTCGCCGGTGCCGGTACCATTGT
CCGGCAGGCACCAAAGATAGGCAACTGCGTGCTGCCGTCAAGGGCCTGAAATGAAGAAAC
TGTAGCCAAGGGGAAGCTAGCTTTAGTACCACGAGACTACAGATTATCCTCTGCTGCCAG
CAAAGTCTAGTTTTCAAATGTAAAGCTAGATAAATAAATCCATGGTTTTCATCAAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10669.1	2015	0.0	1418 - 2011	99	593 / 594	CUST_25198_PI390587928 CUST_7983_PI390587928	ABC15553 ABC18116
AK366260	1905	0.0	1303 - 1878	87	508 / 582	None	ABC15553 ABC18116
MLOC_81871.1	2006	0.0	27 - 602	87	508 / 582	None	ABC15553 ABC18116
MLOC_10669.2	1382	5e-95	1179 - 1367	100	189 / 189	CUST_25198_PI390587928 CUST_7983_PI390587928	ABC15553