barSeed - Barley Seed Development Database

Probe ABC15307

Source Contig ABC15307

barSeed

Links

Affymetrix Source Sequence (837 bp)

>ABC15307 837
GGTGTTCAAGTACCTGCAACATTGGAAGCAGGGACTCCTATACATGGGCTTGCTACAGTC
TTGCTTTCAGTTCTGACAGTCGTTGTTTCTCGTCGGGTCGAAATGAGAAACTAAGGTTTT
ACGTCTCACCTCTCCAGTGACCACCCTCGCGCCTCCTCTCCTCCTACATATTACTTTTGC
GCTTCCCCACCAACGGACCTTTCGCCATGCCCGCGTCCGTCATGCCCACGATGCAGCCAT
GGTGGTATGACCGGCCGTAGCCCAATGTCACGGTGGGGAGGTCGGGGTCGTCCAAGCTTC
GGCAGAAGTTGATGAGGAAGAGGAGAGGTATGCGAGTTGCAATGGTGGAGGGCTGGAGCC
TGGAGGCAGTGTCGGGAGGTCGAGGATGAGAAATATGCGCTCCGTAGTGTGTGAGTGCAG
CATGCTCGCCGGGATGCCACACAGATGGGCGCCATCAGGATCCATGGCTGGGTCAATTTG
GAGGTCAACTCCAGCAGGGCCACTGCCGTGATGTGCCTCATCATGCTGGTGATCTCAAGT
GTGTTTTTGGTCTGAGATATAAGTTTTGTGTTTGGTGAGTCACTTTTGTAGGTGCACGAG
GGACATCGGTGCGACGCGCTGCGGCATGGTTGCGGGAGGAGCTGCGGTGCAAAACATGGA
TTTGTGAGCCCTCCTGTGAAAAAAGGCGACGGGCGAAATTAACACAAGCGGCCCCCGACG
GCGTACATGGGCTCAAGCCAGCACGGGTTCACGGCGGAGCAGTTGCCTCACAATNCCACG
GGCTCTTTTTATTCCTTTTCAGATCCATTTTCCCACATAGCTCTCTATAAGCATTAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK374097	3669	0.0	1849 - 2678	99	820 / 830	None	ABC07945 ABC15307 ABC41226
MLOC_29005.1	779	0.0	1 - 511	99	507 / 511	None	ABC15307 ABC41226
MLOC_29005.2	472	0.0	17 - 396	99	377 / 380	None	ABC15307 ABC41226
MLOC_25483.1	389	1e-172	3 - 389	95	368 / 387	None	ABC15307 ABC41226
MLOC_49103.1	403	8e-129	1 - 354	90	335 / 374	None	ABC15307 ABC41226
MLOC_32400.1	481	4e-77	281 - 481	93	187 / 201	CUST_38340_PI390587928	ABC15307 ABC41226
MLOC_26378.1	233	1e-67	1 - 166	95	157 / 166	None	ABC15307