barSeed - Barley Seed Development Database

Probe ABC14198

Source Contig ABC14198

barSeed

Links

Affymetrix Source Sequence (1219 bp)

>ABC14198 1219
CAGCCCTCCCTCTCCCTCCTGCCGAAGTTTCGCCCGCCAGCGATCCCCGGACGGGAGAGA
GGCGCCGCCCGCAAATGCTGCCGCCGATCATGTGAACTTGGCATCACGAGACGATGCTAC
TCATCATCAGCTTGTAGCACGGCCGTTGGATCCTCTGCGCCAGTCGATCTGGACGGCGGA
GGACGCCGCTGGCCGCGAGCCATTCGAAGCGGCCTGGTCGGGAGCCCTGCAACCCAATCC
GTCCGCCATGGCGCTGTCGGTGCACGCCGTCGCCGTCGCCTCCCCGTGTCTCCTGCCCCC
TCCCTCGCACCACCGCTCTGCTCCGGGCTTGGCGGCTCCTCTCCGCCCCGTCCTCCCTGT
CGTCGCCCCACTCCGCTCCGGCCCCAGCTCCTCCCGGTGGACGCGGCGGGCGAGCGTGCG
GGTACGCGCGAGCGCCGGCGGCGGAGGCGGGCGGAGGAGGGAGTCCCCCTACGAGGTGCT
GGGCGTGTCGCCGTCGGCCGCGCCCGTCGAGATCAAGCGCGCGTACCGGCGCCTCGCGCT
CAAGTACCACCCGGACGTCAACAAGGAGGCGAATGCTCAGGAGAAGTTTCTGAGGATCAA
GCACGCGTACAACACGCTGATGAACTCCGAGAGCCGGTCCAAGTACGCGAGCAGCAGCAG
CAGCCCTGATTCTTCGTGGTCTCCAGGGAGCAGGAAGCCAGCTGATGCAGAAGAGGATTT
CTATGGGTTTGGGGATTTCCTGAATGACCTGCAAACAGAATTTCAGAACTGGGAGGCTGG
CCTGAACTCAGAGCAGAAACCTAAAAGCCTGTGGGAAGAACTATCAGCGATTGGTGAGGA
GTTTGTCGAGTTCCTGGAGAACGAACTGAACATCGACGGCTCGAGCACTGAGGACGACGA
CAGGAACGATCCGTACACGCAGTTTGGAGGGAAAGGCGGAAATGCTGAGGGTGACAAGAA
AGGAACAAGCAGTTCCGACGATGGCGTGTCGGACATAGAGTCGGTCCTCGAGCAGCTGAA
GAAGGAGCTTGGGCTCAGCTGAACCGCCGCCTGTTGGCAACACAGTGGTGGCAACTGCAG
CCATTGTAATTTGTAGCAAATTGGTGTTCATATTCAGGTACGATGTTCTCCCGGATCGAT
GGTGGTAATGGTAGTTACCATTAGATGTTGTAATTTAGCTGGTAGAGCTTTCCGGCAGGA
CGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75928.1	1748	0.0	390 - 1589	99	1191 / 1200	None	ABC14198
AK362352	1367	0.0	75 - 1279	98	1186 / 1205	None	ABC14198
AK358088	1366	0.0	148 - 1267	98	1102 / 1121	None	ABC14198
MLOC_2825.1	458	5e-68	269 - 458	92	174 / 190	None	ABC14198
MLOC_6657.1	161	2e-67	1 - 161	96	154 / 161	None	ABC14198