barSeed - Barley Seed Development Database

Probe ABC13291

Source Contig ABC13291

barSeed

Links

Affymetrix Source Sequence (979 bp)

>ABC13291 979
GGCTCGCCGGCCACGGGCGGCAGGGCAGAGAGTAGCGCAGAGGCCTGGCACAGGGCACAG
GTCAGGCGGCACAGAGGCCGTGGGCTGGGGCGCGGCGCGCGGCCAGGGGCGGCCACGACC
CGGGCGGGCGCGGCCAGGGGTGGCCACGACATGGTGCAGCGGCGGGCGTTGTCGACATAG
ATGGAGCCGGTGCGCGGGGGATCCGGCGGCGGGCGTGGATGGGCGGTGAGCTGTGCGCCG
CGTGCCATCCCGCATGGAGCCGGGACGAGATTGGACGGTGCGTGTCGTCGTTCACCCCGA
CGGGGCCAAGGCGAGAGTCATCGCTGACTGTTCCTAAGGAAGGGTGACCATAATTAAGGA
TTAGCAACTGGCTGCCGCCACCCGTTTCTTTGCTGAGGCAGAAAGCGGAAGGCCATGTCT
GCACCGGAGTTCGCATCCGCGCGCGTGCATTATATTAATGAGGATGACGAAGGTACTATC
CTCCGAGACCGAGCCTTTTCTTCTTCTGTTCTTTTTGTTTGTAGTTCATGATTGATCGAT
TCTTCTTGAGATTCGCGTGAGAATACATACAGGAAAGAAAACCATTCATTGTTAGATTAT
TAATTGAATGCAAGAAGACATCAAATTGGCAATCATTCTACTGATTAGTTTCTTTCCTTT
TGTACGAGGAACACTTCGTCTTCGGTGAATCGCATGGTGGCCGAAACTCCAGCAACCAAC
TTCTGCCGCCATCTTCGGGGGCAATTGCAGATCGCCGGAGTGGCATCCGGTAGACGCTAG
CGTGGCTGATAACGTGTAAAGAGTGAAAGAAGAGAGGAAGAGCAAATGATGAAAATCACT
GTTTCATTGATTGAAGATGTGAGTATATATACCCAGTACAAAGGCGGTTACAAGGAGCAG
TTGTTAAACTAAAGCAACCAACATAGCAGGGATTATCCCTTAATTAATGTATTTAATTAA
TCCCAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK354653	927	0.0	31 - 927	99	895 / 898	None	ABC13291 ABC13292
MLOC_28757.1	556	0.0	1 - 556	100	556 / 556	None	ABC13291 ABC13292
MLOC_80430.1	801	1e-83	350 - 676	84	284 / 338	None	ABC13291
MLOC_8853.2	164	2e-75	1 - 163	98	160 / 163	None	ABC13291 ABC13292
MLOC_8853.1	350	5e-57	1 - 136	96	131 / 136	None	ABC13291 ABC13292
AK356598	638	3e-69	453 - 634	93	171 / 184	CUST_40345_PI390587928	ABC13291 ABC13292
MLOC_48081.1	346	1e-62	1 - 131	100	131 / 131	None	ABC13291 ABC13292
MLOC_80429.1	1104	1e-58	340 - 597	83	222 / 268	None	ABC13291
AK368046	1174	4e-58	784 - 974	88	172 / 195	CUST_40345_PI390587928	ABC13291 ABC13292
MLOC_80430.2	699	4e-58	350 - 587	84	204 / 243	None	ABC13291