barSeed - Barley Seed Development Database

Probe ABC12634

Source Contig ABC12634

barSeed

Links

Affymetrix Source Sequence (749 bp)

>ABC12634 749
GCAACCATATATCATCAATCATCATCATCAGCAGCAGCAGCTGGGGTAGCAGCTAGCTTG
TAAACGCAGGTAGCCAGCACCGCCGGCGCCATGGCCATGTCCAAGCTCGCGCTTGTCATT
CTGGTGGCCACCTTCCTCGCTGGCAGTGGCACCCCCACCAACGGGGATTGTGAGTATCAG
TTGAAGGTGAAGACGGGGGACTGGCCTGGGGACGGCATGGACGAAGCATTCGTGGTGTTT
TGGTTGTTCCGCGATAGCCAGGGCGGCGGCGGCCCCATGGTGTCACATGAGGAGGACGCC
GCTGGCGTCAAGTTCGACCGTGGTAGGACCGACGAGTTCAGCTTCACGGACCCGAAATGC
ATCCGGCCGTGCCGCCTCGTCCTCAGCCTCGACACGTACGGCAGTTCCGGGGAAGGTGAG
GAGTGGCACTGCCAGTCCGTCGACGTCACCATCTCCGGGGACATCTCCTACTCCAAGTCG
TTCCATGTGAATCAGTATGTTGAGTCTGGCAGGCCCATCGAGATCGACGAGTGCGACGAC
GCCGCGGCGGCTTGAGCCCGTCCGTCCGTCCGTCTGTACGTGTGATTGCATGTGCGTGTT
CCCGCGCTCTCCCTGCTGCCAAGATCGTGTTGTTCTCTACGCGTTTAGGTTTGTGAGTTT
GTATTCATATATCACGCGTTGTTATGTTTTTTTCTCAGTTAAAAAAATAATAAGCGGGAT
GAGTTTTCGTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_53898.1	980	0.0	207 - 938	99	726 / 732	CUST_30975_PI390587928	ABC12634 ABC36932
AK354010	1071	0.0	342 - 1071	99	725 / 731	CUST_30975_PI390587928	ABC00014 ABC00040 ABC00041 ABC00075 ABC00082 ABC00094 ABC00102 ABC00105 ABC00106 ABC00124 ABC00130 ABC00135 ABC00141 ABC00176 ABC00186 ABC00196 ABC00201 ABC00204 ABC00338 ABC00349 ABC00570 ABC00657 ABC00660 ABC00676 ABC00684 ABC00787 ABC00971 ABC12634 ABC32138 ABC36932