barSeed - Barley Seed Development Database

Probe ABC11709

Source Contig ABC11709

barSeed

Links

Affymetrix Source Sequence (1350 bp)

>ABC11709 1350
GGCCGTGGCCGGCCTCCCGGACTTCCGCTTCGCCACCATCCCAGACGGCCTGCCCACGTC
CAAAGCAGACGCCGACGCTGACGCCACGCAGGACCCGCCGTCCCTTTGCTACTACACCAT
GACCACCTGCCTCCCCCATTTGAAGAACCTGCTCCGCGACCTCATCGCCGCCGTTGGGGC
GCCGCCGGTGAGCTGCATCGTGGGTGACGGCGTCATGAGCTTCTGCGTGGACGCGGCCGC
GGAGCTCGGCGTGCCGTGCGCGCTGTTCTGGACTGCCAGCGCCTGCGGCTTCATGGGCTA
CCGCAACTTCCGGTTTCTCCTAGACGAGGGCCTCACCCCTCTCAAAGACGAAGAGCAAGT
GAAGAACGGGTACCTGGACACGCCGGTGACGCAGGCACGTGGGATGAGCAAGCACATGCG
CCTCCGAGACTTCTCCTCCTTCGTCCGCACCACGGACCGCAGCGACATCCTCTTCAACTT
CCTGCTGCACGAGGTCGAGCAGTCGGATCGCGCGACCGCCATCGTCATCAACACCATTGA
CGAGCTCGAGCAGACGGCGCTCGACGCCATGCGCGCCATCCTCCCCGTGCCCGTCTACAC
CATCGGCCCGCTTAACTTCCTCACCCAGCAGCTGGTCTCAGAAGGCGATGGCGGCGGAAG
CGAGCTCGCGGCGATGCGCTCCAGCCTCTGGAGAGAAGATCAGTCATGTCTCGAGTGGCT
CCAGGGCAGGGAGCCGCGGTCCGTGGTGTACGTCAACTACGGGAGCGTGACCACCATGTC
GAAGCAGGAGCTGGTGGAGTTCGCGTGGGGACTGGCCAACTGCGGCTACGACTTCCTCTG
GATCGTGAGGAACGACCTGGTGAAGGGCGATGCCGCCGTGCTGCCTCCCGAGTTCATCGA
GGCCACCAAGGGCAGATGCCTCCTGGCAAGCTGGTGCGAGCAGGAGGCGGTCATGCGTCA
TGAGGCGGTGGGCGCCTTCTTGACGCACTGCGGGTGGAACTCCATGATGGAGGGGCTCGG
CGCCGGCGTGCCGATGCTCTGCTGGCCCTTCTTCGCCGAGCAGCAGACAAACAGCCGCTA
TGCGTGTGTGGAATGGGGCGTTGGGATGGAGGTCGGCGATGATGTGCGTCGGGTGGTGGT
CGAGGCGAGGATAAGGGAGGTGATGGGAGGGGGAGAAGTAGGAAGGGAGATGCGGAGGAG
GGTGGCAGAGTGGAAGGAGGTCGCTTCTCGCTCGACCGCGCAGCTTGGTGGCCGGTCGTT
GGCCAACCTTGAGAGTCTGCTCAAAGATGTACTGAAGTGATCAGATCACCAATAACAAAT
AATTAAGCTGGGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK365271	1746	0.0	195 - 1527	99	1329 / 1333	None	ABC09397 ABC10240 ABC11709 ABC37083
MLOC_53505.1	1094	0.0	1 - 911	99	906 / 911	None	ABC11709
MLOC_64239.1	1805	0.0	255 - 1523	84	1087 / 1293	None	ABC10240 ABC11709
MLOC_65245.2	1797	0.0	326 - 1491	79	942 / 1195	CUST_9945_PI390587928	ABC11709 ABC22849
MLOC_65245.1	1988	0.0	391 - 1556	79	942 / 1195	CUST_9945_PI390587928 CUST_26913_PI390587928	ABC11709 ABC22849
AK252107.1	1750	0.0	198 - 1363	79	942 / 1197	CUST_9945_PI390587928 CUST_26913_PI390587928	ABC11709 ABC22849
MLOC_53504.1	324	2e-152	20 - 324	99	301 / 305	None	ABC10240 ABC11709
AK359078	1674	2e-112	297 - 1410	74	846 / 1145	CUST_9947_PI390587928 CUST_24807_PI390587928	ABC11709 ABC14081 ABC37155
MLOC_73380.1	1468	2e-112	67 - 1180	74	846 / 1145	CUST_9947_PI390587928	ABC11709 ABC14081 ABC37155