barSeed - Barley Seed Development Database

Probe ABC10650

Source Contig ABC10650

barSeed

Links

Affymetrix Source Sequence (669 bp)

>ABC10650 669
TCAGATCGGTTGATCTCAGCATGTGCGTTCTGCTCAATTAGTCCAAAACTGCCGAGGCTT
GAAGAACTCCTAAAGACTTGGTTCAACGAGAAGAATGAATTCAACAGGACAATGAACTTC
TTCGAAGCTAGAGTGACGTCAATGACCCTGGTAAAATTCCGTTTGGAGCTCGAGAGGGAC
ATCACCGAAGAGGACGACATCTGGGACGATGTTCCAGAGTGGAAAACCTTGCCTGTGGTC
CAGCGAATCACACTTGACGTCATCGCAAGGGTTGAGGAAGAGGGAAGGCTCAAGGCTATA
TCGGTGAAGAAGGTGAGGAAATCTTTAGAGATAGCGGACGCTACTTCTTGGAGCAGCCTG
ACTTCGAACGTCTCCTTCGCAGACTTCACGTCGTTGGTTCTGCCGCCTGATCCGTTGTCA
CTGGATGTAAAATGGTAACAGTTTCTCCTTGTCTATTTACTTCTGATACTGTTAGGGGCT
GATAGGAAATTGCACATATACATCAATTTCGTGTATGATTGTCTGGGCCAGAAGTGTACC
TGCAAATGTGGTTTGTCTGTAACGCAAGGTTGAGGTTTTGTATTGTTCCTGACTAAGTTA
CCGACTCTCATCTGGACCACGGTGGAGTAAATCAAATTATCAAAGCATTGTACAAAAAAA
AAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_63880.2	2903	75 - 728	100	654 / 654	CUST_24663_PI390587928	ABC10650 ABC10651
MLOC_63880.3	1684	1 - 582	100	582 / 582	None	ABC10650 ABC10651
MLOC_63880.1	4777	3156 - 3590	100	435 / 435	CUST_17435_PI390587928	ABC10650 ABC10651 ABC12217