barSeed - Barley Seed Development Database

Probe ABC10533

Source Contig ABC10533

barSeed

Links

Affymetrix Source Sequence (929 bp)

>ABC10533 929
CGCTCCCCTCCCCTCCCCTCCCCTCCCGTCTCCGCTCCGCCTTGTCCCTTTCCCCCCTCC
GCTTTCCTCACCTCCCATCGCAGGCGCAGGCGCAGGCGACCCGATCCTCTCCCCCCACAC
CCTCCTCGTCTTATCCCCAACAGTGCACGCCACGTTCTTGATTGTCGGTCCCGCCCCGGG
CCGGGATGTCTTCTCCGAGCAAGCGCCGGGAGATGGACCTCATGAAGCTGATGATGAGCG
ACTACAAGGTCGAGACGGTGAACGACGGGATGCAGGAGTTCCTCGTCGAATTCCGCGGGC
CGGAAGAAAGTCTCTACCAAGGAGGTGTATGGAAGGTTCGAGTAGAACTGCCCGACGCGT
ATCCTTACAGGTCCCCATCGATTGGTTTCGTTAATAAGATATATCACCCAAATGTCGATG
AACTGTCTGGCTCCGTCTGCTTGGACGTCATTAACCAGACGTGGAGCCCAATGTTTGATC
TTGTCAATGTGTTTGAAGTCTTCCTCCCGCAACTTTTATTATATCCAAATCCTTCTGATC
CATTGAACGGAGAAGCTGCTGCACTCTTGATGCGTGATCGTCCTGCTTATGAGCAAAAAG
TGAAAGAATTCTGTGAGAAATATGCCAAGCCGGAGGATGCGGGTATAACTCCAGAGGATA
ATTCAAGCGACGAAGAGCTGAGCGAAGATGACGATGACTCCGGTGACGATGAGCCCATAC
TGGGCCATGCAGACCCCTAGTCGATTCAGGACCTGTTTCTCCGGCTCAATTCGCACACAA
TGTTTTCTTGCAGCAAACTGCAATTAAACAGCATGTAGTCCGTCCACGCCCAAGTCTGAA
TGCCATGTAAATAAGTGCACTGTCAATGTTTTCTAATGTTACCTCCAGCCTCAGTTTAAT
ATGCAGCAGCACTTAAATTTACCTCTGAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249331.1	981	0.0	38 - 981	97	917 / 944	None	ABC05962 ABC10533
MLOC_3474.1	3543	0.0	209 - 814	100	606 / 606	None	ABC05962 ABC10533
MLOC_3474.3	1852	0.0	1 - 589	100	589 / 589	None	ABC05962 ABC10533
MLOC_3474.2	1994	1e-117	34 - 266	99	233 / 234	None	ABC10533
MLOC_38616.2	608	2e-169	17 - 342	99	325 / 326	None	ABC10533
MLOC_38616.1	1311	9e-169	199 - 523	99	324 / 325	None	ABC10533
MLOC_38618.1	343	9e-169	8 - 335	99	326 / 328	None	ABC10533
AK251311.1	838	2e-141	143 - 700	83	466 / 561	None	ABC05962 ABC10533
MLOC_17342.2	1333	3e-119	673 - 1094	85	359 / 422	None	ABC05962 ABC10533
MLOC_27673.1	146	4e-63	1 - 144	97	140 / 144	None	ABC10533