barSeed - Barley Seed Development Database

Probe ABC09381

Source Contig ABC09381

barSeed

Links

Affymetrix Source Sequence (1058 bp)

>ABC09381 1058
GGCACGAGGACTTGAACACGTGCACCGCATCCGTACGCCACAGGCCAAGACGAGGCCATG
GCCGAGGCCGGGGAGCTGGTGGTGAGCGGCGCCCAGCAGGACGACATGCTGCGAGTGGTG
GCCGCCCTGGCCGGCATCCTGGAGCGCGTCGCTGAGTGCAACGACGCGGTGGGCACGCCC
GCGGGGGTGCCGCCGGCGTCGGCGTCGGCGTTCCGGGCAACGACCAAGCCGGGCATCTCG
GTGCGCACGTACGTGGCGCGCATCGCGCGGTTCGCCGGTTGCAGCCCCGCGTGCTACGTC
GTCGCCTACATATACCTCGACCGGCTCCTGCACCGCGCCCGCCGCTTCGCCCTCGCCGTG
GACTCCTACAGCGTGCACCGTCTCCTCATCACCACCGTGCTCGCCGCCGTCAAGTTCATG
GATGACGTATGCTACAACAACGCGTACTTCGCCAAGGTTGGGGGCATCAGCCTGGTCGAG
ATGAACTACCTGGAGGTCGACTTCCTGTTTGGCGTCGGGTTCGACCTCAACGTCACGCCG
GAGACGTTCGGCCACTACTGCGCCGTGCTCCAGTCCGAGATGCTCTGCGCGGAGGCTCCT
CCTGCGCCGCCCAGGCTGCAGCACTGCTGCCTCTCCGAATCCGAGGACGATGCCGCCAGC
TGCGGCAGCCAGCAGCAGCTCGCGGCATGAAACCACCGGCCGGCCAGCACCGGGCTGCTT
GGAAGCAAGTTCGCATTACATTACATGGCCGGTTGCATGATGCGTGCATCTCTGTTAGTC
TGTGTGTTTAAATTTGTAGTGCTAGCCAGATAGCTATAGCTAGGTGGTCGTCATCTTCCT
CCATGCCCTGCTGCAAGATGCTTGCAACAATGATTTCACATCGTGTACTCGTCCTTGGTT
TTTGTTTCTTGTGGTGTGTAGGTCAGTGAGACACTAGCGTGTTAGGCTTTGCTGGATTTT
TCTCTTGTGAAACAGATTTGTACAGTCATGAACCTGTTGGTAACTTTAGCATTCCATGTA
TATATTGTGACATTGGGTTAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_51179.2	1344	0.0	1 - 982	99	981 / 982	None	ABC09381
MLOC_51179.1	1173	0.0	1 - 589	100	589 / 589	None	ABC09381
AK358760	993	8e-130	115 - 582	85	412 / 487	CUST_3605_PI390587928 CUST_22470_PI390587928	ABC09381 ABC24544
MLOC_66940.1	1954	5e-52	465 - 624	90	144 / 160	CUST_3605_PI390587928 CUST_22470_PI390587928	ABC09381 ABC24544
MLOC_66940.2	1061	5e-52	348 - 507	90	144 / 160	None	ABC09381 ABC24544