barSeed - Barley Seed Development Database

Probe ABC09320

Source Contig ABC09320

barSeed

Links

Affymetrix Source Sequence (1543 bp)

>ABC09320 1543
GGCAGCTCGCTGCGGGGCAAGGGCAGCGCCGTGCATGAGTACGTAGTAGGGATGAGGATC
GTAACGCCTGCACCGGCCAGCCAGGGATTTGCCGTGGTCAGGGAGCTCAGCATCGGGGAC
CCTGACCTCGACGCGGTCAAGGTCTCCCTCGGCGTCCTCGGCGTCGTGTCCCAGGTTACG
CTAGCCTTGCAGCCGATGTTCAAGCGGTCGGTGACGTTTGAGAAGCGCGACGACACAGAC
TTCGCGTCGCAGGCGGCCATGTGGGGCGGGCTGTACGAGTTCGGTGACATGGCGTGGCTC
CCGCGACAAGGCAAGGTGATCTACCGCAAGGACGATCGCGTACCCGTCTCCACCAAGGGC
AACGGCCTCAACGACTATCTCGGCTTTCGCTCCAACCCGACGCTCGCGCTCATCACCGCC
AGAGCCACGGAGGAGCACCTGCAGAAGGACGGCAGCAACATCGCCAGGTGTCTTGCGGCG
CGGGCGCCATCCGTGCTTTTCGAGCTGCAGGCCTACGGCTTCACCAACGACGGCTCATTC
TTCACGGGGTGGCCCGTGGTGGGGTTCCAGAACCGCATCCAGGCATCCGGGACCTGCATC
AGCAGCCCGGAGGACGGGCTCCTATCCTCCTGCACGTGGGACCCGCGCATCCGGAGCCCC
TTCTTCTACAACTCCGGCTTCAGCGTGGCGCTCTCCAAGGCGCCGGCCTTCATCGCTGAG
ATGCAGAAGCTCCGCGACCTCAAGCCGCGCGCCTTCTGCGGCCTCGACGCCAAGCTCGGC
GTGCTCCTCCGCTACGTCAGAGCCTCTTCCGCTTACCTCGGGAAATCCGAGGACTCGATC
GACTTCGACGTCACCTACTACCGGAGCTACACTGAAGGTGAGCCGCGCGCGGATTCCGAC
GTGGTCGACGAGATCGAGCAGCTGGCGCTGCGCAAGTATGGCGCCGTCCCACACTGGGGC
AAGAACCGTAACTTTGTCTTCGACGGCGTCATAGCCAAGTACCCCAAGGCTGCTGAGTTC
CTCAAGGTGAAGGCCAGGTACGATCCCGACGGGATCTTCTCCAGCGAGTGGAGCGACCAG
GTGCTCGGCGTCAAAGGGAGCCCCAACATCGTCCAGAAGGGATGCGCCATTGAAGGGCTC
TGCGTCTGCTCCGAGGACTCGCACTGCGCGCCGGAGAAGGGCTACTTCTGCCGGCCGGGG
ACGGTGTTTCCGGAGGCGAGAGTATGCTCGACCCGAGCCAGTTTCGGCGACGAAAGCGAC
GACCTTCTGGAGGAACAGTGATTCGAGGTGCATGCATGCATGCATGCGCCGGGTCAAGCG
GCAGCGCATCTAAGTTTAGATTGCGATGCTGACTTTAATGTTGCTTGTACGTGGCGTGTT
TAATTTCTTCCAGAGATTGGAGTATCGATCTCTACTGGTAGTAAGTTTGTTTGATTGATC
CGAGCTACTTTATGTTATCTTATTATGGTTTGGTTATTGTTCTGATTGGAAGCAATTGAA
ATTCAAACTAAACGCCATGTTTACTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368527	1939	0.0	410 - 1937	100	1528 / 1528	CUST_31668_PI390587928	ABC09320 ABC22536 ABC42695
MLOC_34835.2	1553	0.0	1 - 1492	100	1492 / 1492	CUST_31668_PI390587928	ABC09320 ABC22536 ABC42695
AK367303	2071	0.0	590 - 2071	99	1480 / 1482	CUST_36420_PI390587928 CUST_31668_PI390587928	ABC09320 ABC22536 ABC42695
MLOC_34835.1	1338	0.0	1 - 1321	100	1321 / 1321	CUST_31668_PI390587928	ABC09320 ABC22536 ABC42695
MLOC_31769.1	1684	0.0	251 - 1504	80	1009 / 1261	None	ABC09320 ABC14510
AK361483	2224	0.0	574 - 1827	80	1006 / 1261	CUST_19942_PI390587928 CUST_33636_PI390587928	ABC09320 ABC14510
MLOC_59091.1	1921	0.0	180 - 1391	79	969 / 1220	None	ABC09320 ABC14510 ABC22536
MLOC_80472.1	1057	4e-159	1 - 694	82	567 / 695	None	ABC09320 ABC14510 ABC22536