barSeed - Barley Seed Development Database

Probe ABC09148

Source Contig ABC09148

barSeed

Links

Affymetrix Source Sequence (797 bp)

>ABC09148 797
GCGGGCGGCGATGCAGCCAGCCAGAGGGCTGCGGTGGAGCCGGTCCATCTGCCAACGCCG
GAGGAGTTCAAGGGGCAGGAGATGATGAACAACTGCGCCGTCCGGAGCGTCCTCAGTGGT
GTCATGGGGGGTGGTCTTGGTGTACTTATGGGACTATTTTTTGGAGCTTTGGAAAATCCA
ATAATGGCAGAGGAGATGACAGCAAGACAACAAATAGTCTACCAGGCAAAACAAATGGGT
AGGAAGAGTATGAGCCATGCTAAGACCTTTGCAGTAATGGGCTTGATTTTCTCTGCAGCT
GAATGTGTCGTGGAGAAGGCTCGGGCAAAGCATGACATTACCAATTCGGCAGTAGCTGGC
TGTGTCACAGGAGGGGCTTTAGCTGCAAAAGGTGGCCCTCAAGCTACATGTATCGGGTGC
GTGGGTTTTGGTGCCTTCTCTGTGGCGATTGAGAAGTTCATGGATAGACACACATGAATC
GGTGATGAAAACGTTGCATCCAACTACTGTACAAATCAAGTGACGCTCCTATCTTTGTAG
CAAGCAGCATTAGCAGGGATTCAGCATTGGCCGAAGAAGTTGTGGCTATTTTGCAATACT
CAGTGTAGCCAAACCAAAATTTGACTACGTCTTGCGGCAATCCATAGCTATTTTATTTTC
TCCAGTCTGTAGCCAGTCTGATGCCAGTCTTATATCTTTGCTTGAGAGAAGTCACTTAAA
CATATGTGGCTTATGTCTGTCTGGTCTCCATTGGTTTCAGACAAGTCTATTTAACTTTTT
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68747.3	1198	0.0	338 - 1106	98	766 / 780	CUST_40621_PI390587928	ABC09147 ABC09148
MLOC_68747.2	1137	2e-60	346 - 472	100	127 / 127	None	ABC09147 ABC09148
MLOC_38007.1	1097	0.0	227 - 675	96	431 / 449	None	ABC09147 ABC09148
MLOC_68747.1	1031	2e-124	790 - 1031	100	242 / 242	None	ABC09147 ABC09148
MLOC_50242.1	481	6e-100	196 - 481	91	259 / 286	None	ABC09148
MLOC_45983.1	410	2e-75	221 - 410	94	178 / 190	None	ABC09148
MLOC_45983.2	924	2e-75	735 - 924	94	178 / 190	None	ABC09148
MLOC_45983.3	1235	4e-72	1052 - 1235	93	172 / 184	CUST_21857_PI390587928	ABC09148
MLOC_45983.4	1108	4e-72	925 - 1108	93	172 / 184	CUST_21857_PI390587928	ABC09148
MLOC_45982.1	327	1e-71	145 - 327	93	171 / 183	None	ABC09148