barSeed - Barley Seed Development Database

Probe ABC08434

Source Contig ABC08434

barSeed

Links

Affymetrix Source Sequence (934 bp)

>ABC08434 934
GGCTGCAGGAATTCGGACGAGGGGCCGATGATTTTAAAATTGGCCAGGATTTGCTTCTAA
GCATCAAAGAGGACACTGAATTTACTATAGTACGGGAAAACATAAAGAAGAAGCTTGAGA
TGATATGTGATGAGGTTGTTGTCAATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTAC
AACATTTGTCAGCTCAATTAGCTGCAAGATTAAGAAATGAGGACGACGAGTTTGACATCC
TAAATGCTCTTCATCCAAGCCCAGCTGTTTGTGGCTTGCCCACTGAAGAAGCGCGCCAAT
TCATACGAGATTATGAAATTTTCGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTG
GTGGGGCTGAAAGTGAGTTTGCTGTTGGGATTAGATCAGCACTACTTGGAAAAGGATATA
GCACTTTAGTTTATGCCGGTGCCGGGATTGTCGAAGGTACAAATCCATCTTTTGAATGGG
ATGAGCTTGATCTCAAAGCATCTCAGTTTGCAAAGTTGTTGAAGTATCAAGAACATCATA
TTTTCTACCAAGAGGCAGGAAACATGGGGACATTGATTTGAACTGTAACTAATAAGTCAT
CAGAGATTACAATGCTTAGAAAGAGGGAAGTTTTGATTTGATGGGAAGATTCTAAATGGA
GTTCGTCGGTTTGTGTGTGTGCGTAGTAAACTTGAAAGGATTTCAGCCTGATTTGCATGG
CTCCTGAAGATGCAATCACAAAAATATCGATTCGAGGAGATGACAGTGATGATAGTCGTG
GAGCGTACAAAAGATTAAATAAAAGCATATTAGATAATTATGTACAATGATTGTAACAAA
CCAGTTTAGTGCAAGTGTATATTACCATTCTTTTGAGTTCTTCTCCGGCCTGGTTGTTCA
ATGCTTATATATCGGAGCTTCTTGTTGCAAGCAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64156.1	2189	0.0	1200 - 2129	98	913 / 930	None	ABC08434
MLOC_64156.10	1998	0.0	1 - 760	100	760 / 760	None	ABC08434
MLOC_64156.4	752	0.0	1 - 738	100	738 / 738	None	ABC08434
MLOC_64156.2	2339	6e-106	855 - 1063	100	209 / 209	None	ABC08434
MLOC_64156.3	2335	6e-106	855 - 1063	100	209 / 209	None	ABC08434
MLOC_64156.11	3428	0.0	1 - 654	100	654 / 654	CUST_26943_PI390587928 CUST_26942_PI390587928	ABC02832 ABC02833 ABC08434
MLOC_64156.7	2277	2e-90	1 - 181	100	181 / 181	None	ABC08434
MLOC_64156.5	1800	9e-119	1 - 232	100	232 / 232	None	ABC08434
MLOC_64156.6	2006	2e-115	1 - 226	100	226 / 226	None	ABC08434
MLOC_64156.8	2275	0.0	1 - 391	100	391 / 391	None	ABC08434
MLOC_64156.9	2517	2e-90	1 - 181	100	181 / 181	None	ABC08434