barSeed - Barley Seed Development Database

Probe ABC08337

Source Contig ABC08337

barSeed

Links

Affymetrix Source Sequence (1094 bp)

>ABC08337 1094
GATTCCGTCCAGCCCACCACCCAAGGTCGCCGCGGATCTAGCCTTGCCGGAGAGGAGAGA
TGAAGATCACGGCGCTCGTCGTGCTGAAGCCGTCGGCCGGAGGCGCTGGGGGATCCTCGT
CGAGCGGCGGGCAGGGCGCCGAGGCGCTCGTGCTGGCCAACGCCACGGACGTCAGCCACT
TCGGCTTCTTCCAGCGCGGCGCCGCCCGCGAGTTCATCGTCTTCGTCGCCCGCACCGTCG
CCCAGCGCACCCAGCCCGGCCAGCGCCAGTCCGTCCAGCACGAAGAATACAAGGTTCACT
CACACAACAGAAATGGCCTCTGTGTGGTGGCTTTTATGGATGATCACTATCCTGTACGAA
GTGCATTTTCTCTTTTGAATAAGGTACTTGACGAATACCAGAAGGCTTTTGGGGATGCTT
GGAAAGCTGCGACAGCAGATTCCACTCAAGAGTGGCCTTTCCTGATGGACGCTTTGACAA
AATTTCAGGATCCTGCAGAGGCTGACAAGTTAACAAAAATCCAGAGGGACTTGGATGAAA
CAAAAATTATCCTGCATAAAACTATAGAGAATGTTCTTCAAAGAGGAGAGAGGTTGGATA
GCTTGGTTGAAAAAAGCTCAGACCTCAGTGCTGCTTCACAGATGTTCTACAAGCAGGCGA
AGAAAACAAACAGTTGTTGTACTATACTCTGAAGTTTGAACTGTGATCCTTCAGTCTCTC
TTGGAAGGCTCCAGAAAGAAAATCAATTGAATACCGTTGTGTTGTACCGTAAGCCGACTG
CTCATGAAAACGTGCCGGGATCAATACTGTAAATCTGTTATTCTTTGGTGACGCCTTCGA
ATAGCAACTAACACCACTTAGCAACGGCCAACATCATCGTCTTCCCTGCGTAGATTGTCG
ATATCTCTCAGTTATCAAGTATGTTGGAGCACCGTTGCTGCCCCTTAATTTATGTATGTT
GGAAAACTGGTTGCTATTCATAATTCGTGTTTGTGATATGATTGAAGATTGACGGTACTA
TGCTTCTGTTATTATATACCAGTTTATTTATGTTGAGAAAAAAAAAAAAAAAAATNGAGG
AGGGGCCCGGACCC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369817	1046	0.0	3 - 1046	99	1043 / 1044	CUST_34309_PI390587928	ABC08337
AK371751	1061	0.0	59 - 1061	100	1003 / 1003	None	ABC08337
AK357084	1210	3e-139	942 - 1210	100	269 / 269	None	ABC08337
MLOC_15267.2	1623	0.0	852 - 1491	100	640 / 640	CUST_1701_PI390587928	ABC00014 ABC00094 ABC00338 ABC00657 ABC08337 ABC32013
MLOC_44746.5	703	0.0	284 - 703	99	419 / 420	CUST_34309_PI390587928	ABC08337
MLOC_44746.4	825	0.0	406 - 825	99	419 / 420	CUST_34309_PI390587928	ABC08337
MLOC_44746.2	652	0.0	234 - 652	99	418 / 419	CUST_34309_PI390587928	ABC08337
MLOC_44746.6	813	8e-170	487 - 813	99	326 / 327	CUST_34309_PI390587928	ABC08337
MLOC_44746.3	762	8e-170	436 - 762	99	326 / 327	CUST_34309_PI390587928	ABC08337
MLOC_44746.1	938	8e-170	612 - 938	99	326 / 327	CUST_34309_PI390587928	ABC08337
MLOC_66373.1	1020	5e-67	313 - 583	84	238 / 284	None	ABC08337
MLOC_66373.3	1060	5e-67	305 - 575	84	238 / 284	None	ABC08337
MLOC_15267.1	996	1e-53	852 - 972	98	119 / 121	CUST_1701_PI390587928	ABC00014 ABC00094 ABC00338 ABC00657 ABC08337 ABC32013