barSeed - Barley Seed Development Database

Probe ABC08141

Source Contig ABC08141

barSeed

Links

Affymetrix Source Sequence (1246 bp)

>ABC08141 1246
GCAGACCCACCGATGGCCGTCGGCGAGGAGGTCAAGCTCTCCATCTCCGGCGCGGCCCTC
GCGGCGCTCCTCCACCGCTGCGGGGCCGCCGCGGGTGACTGCGACGGCCTCCTCTTCGGC
CGCGCCCACCGCCCCCCTCCGCCGGCTCCCACCCTTTCCGACTACGACGACCAAGCCCCC
GCCGCCCCGTGCCTTTTCATCTCCATCTCCGGCCACTCCTCCCTCTCCCACCCCTGCTCC
CTCTCAGATCCCCTCGGCCGCCCCCACCCGCCGCCGCCCTCCTCCCCTTGCCCTCTCGGC
TTCTTCTCGTCCCGCCGCCGCGCCCCTCTCCGCGCCTCCATGCGCGAGCTCGCCCTCGCC
TGCTCCCTGTCCAAAACCCTATCGCCCCTCGCCCACCCGCTCCTCGTCATCCTCGTCTCC
CCCAACACTTCCGACGACCTCTCCACCCACTCCTTCGACTACCGCGCTTTCCTCCTCGTC
GGATCCCGCCTCGTCCCGACCTCGCTCGCCGTCGTCAACGTCGGCCCCGGCTTCCGGGAT
CAGTACCACTCCTTCGCCCCGGAGTCGTCCTTCCCGTTGCTCACTCAGCCGTCGCCGCCG
GCGGCGCCCGAAGCAGAGGATGCTTACAGCATCGGAGAGCAGAAGAAGGTGGATGCGATG
GTGGACGGGTTTGGGCTAGGGAGGCTGCAAGAGCTCGTGGGTGCTGTGGCCGGGCAGGCC
GCGGGGATGGATAGCATGTATGCCGGGATGCTCCAGAGGATGGAGAAGCTCGCCAGGGAG
GTGGAGAAGAGCAATCACCGCGTGCTCGACCAGGAAAAGCGGAACCTGGTGCTGAGGTCC
AAGACAGCAGGACTGTAATAAAAGACCGAAGCTTCTTTCGGTCTCAGCAAGTGTGTATAT
GCTCCGGAATATCGGAGCAGCGTGTCTCCGGTTAGGGATTGATTCGTGCATTGCACGGCA
GTAGTTAATCCATTGGAGTGATGGCTCTCTAGGTGGTGTGCTCCATGGGTGGAGTTGGGA
GGACGGCTTGCCGTTCAGAAACCGATGGTGCTGGCAAAGTGCAGCGTTGAGTCATGGTCG
TCGTTGCCCTGCTTCTCCTATTCGTTTCTCTTGTGATTGAGCAGACTGAGTTGTAGTTTT
TCTTCAGACGCAGCGTGACAACATTTATGCTATGGAGAGAATGATTTGTTATGGTGATTA
CGATTTGTTGAGTTTTTTCTTTGAACTGAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_80711.2	1226	0.0	13 - 1226	99	1212 / 1214	CUST_15117_PI390587928	ABC08141 ABC38416
MLOC_80711.3	2221	0.0	1 - 1159	99	1154 / 1159	None	ABC08141 ABC21912 ABC38416
MLOC_80711.5	1135	0.0	205 - 1095	99	887 / 891	None	ABC08141
MLOC_80711.4	1462	0.0	367 - 1256	99	886 / 890	None	ABC08141
MLOC_80711.1	4907	1e-177	161 - 507	99	345 / 348	CUST_15117_PI390587928	ABC08141 ABC21912 ABC38416