barSeed - Barley Seed Development Database

Probe ABC07356

Source Contig ABC07356

barSeed

Links

Affymetrix Source Sequence (1713 bp)

>ABC07356 1713
CACGCAGCATCTCACATTTGTCTCGCAGCACAGACGTCACACGGAGCCTTGATCTCGCAG
CAGCTCTACCCGGCCGGCCGGTCACTGGTGAGACAAGGACTGGCTAGCTAGCTCGTCGGC
CGCTGGTACGTACGTAGGAGATCGATCGATGGCGGCGACGATGACGGTGGAGGAGGTGAG
GAACGCGCAGCGGGCGGAGGGCCCGGCCACCGTGCTCGCCATCGGCACGGCGACGCCGGC
CAACTGCGTGTACCAGGCCGACTACCCCGACTACTACTTCAAGATCACCAAGAGCGACCA
CATGGCTGACCTCAAGGAGAAGTTCAAGAGGATGTGTGACAAGTCGCAGATCAGGAAGAG
GTATATGCACCTAACGGAGGAGATCCTTGAGGAGAACCCCAACATGTGCGCCTACATGGC
GCCGTCCCTGGACGCGCGCCAGGACATCGTCGTCGTCGAGGTCCCCAAGCTCGGCAAGGC
GGCGGCGCAGAAGGCCATCAAGGAGTGGGGCCAGCCGCGGTCCAAGATCACCCACCTCGT
CTTCTGCACCACCTCCGGCGTCGACATGCCGGGGGCCGACTACCAGCTCACCAAGATGCT
CGGCCTGCGCCCCTCCGTCAAGCGCCTCATGATGTACCAGCAGGGCTGCTTCGCCGGCGG
CACCGTGCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTGCTCGT
CGTCTGCTCCGAGATCACCGCGGTCACCTTCCGTGGCCCGCACGAGTCCCACCTCGACTC
GCTGGTGGGCCAGGCGCTCTTCGGCGACGGCGCGGCCGCGGTGATCATCGGCGCCGACCC
CGACTTGTCCGTGGAGCGTCCCCTGTTCCAGCTGGTGTCCGCGAGCCAGACGATCCTGCC
GGACTCGGAGGGCGCCATCGACGGCCACCTCCGGGAGGTCGGACTCACCTTCCACCTCCT
CAAGGACGTGCCGGGGCTCATCTCCAAGAACATCGAGCGTGCCCTAGAGGAGGCCTTCAA
GCCGCTGGGCATCGACCACTGGAACTCCGTCTTCTGGATAGCGCACCAAGGCGGCCCGGC
GATCCTCGACATGGTCGAGGCCAAGGTAAACCTGAACAAGGAGCGGATGCGCGCAACCAG
GCATGTCCTCTCCGAGTACGGCAACATGTCCAGTGCATGTGTCCTTTTCATCATGGACGA
GATGCGCAAGCGCTCTGCCGAGGATGGCCACGCCACAACCGGCGAGGGAATGGACTGGGG
CGTTCTCTTCGGCTTCGGCCCCGGCCTCACGGTGGAGACCGTCGTCCTCCACAGCGTCCC
CATCAGCGCCGGCGCCACCGCGTGATCGCTCTCCTTCTCGACCGTTTATCTTCGTCATGG
AAAAACCTACTGCATGCGTACAGCTTCTTCTATACTACACTGCCGAGTTTGTGCTATATT
CTACCGTGCGTGGTTTGTATGTGTTGGTAGATGAATTCTCTCCTGTTAGTCTGTGTCGCG
CACGGCGCCGTCGCATACTACTAGTAGTAACACAACCGAGCTTTTACAGGTTTATTAAGC
AAGTGTGGTCATGATGTGGAGTGTGAGGTGTATTACCTGTGTACGAAAAGATTGGCTGTT
CAATTTGAACCTTATGTGGTTGGAAAACAAATGGTGATTTTTCATATCTTTATCAAAACT
TATTCTCCTCTTTCCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_74116.1	1710	0.0	1 - 1582	99	1579 / 1582	None	ABC07356 ABC07358 ABC11343
MLOC_7936.1	3358	0.0	1225 - 2472	92	1154 / 1255	CUST_11048_PI390587928 CUST_31904_PI390587928	ABC07356 ABC07358 ABC11343 ABC16574
MLOC_64305.2	1717	0.0	173 - 1433	89	1132 / 1272	CUST_31902_PI390587928 CUST_31905_PI390587928	ABC07356 ABC07358 ABC11343
MLOC_64305.1	1461	0.0	43 - 1248	90	1089 / 1211	CUST_31905_PI390587928	ABC07356 ABC07358 ABC11343
MLOC_7936.2	3596	2e-78	1225 - 1423	94	187 / 200	CUST_31904_PI390587928 CUST_11048_PI390587928	ABC07356 ABC07358 ABC11343 ABC16574