barSeed - Barley Seed Development Database

Probe ABC06501

Source Contig ABC06501

barSeed

Links

Affymetrix Source Sequence (641 bp)

>ABC06501 641
GTTTGATGATGCCGCCAAAGTGCTTGCTAAAGAATTAACAGCCGCAGGCATCTCACACAT
TATTGACACGACTGGCATTTCTATCGGGAGGAGGTATGCAAGGACGGACGAGATCGGTGT
TCCTTTTGCAGTAACGGTCGATTCTGCAACGGAGGTGACGATCCGAGAGAGGGACAGCAA
GCAGCAGGTGAGGGTGGGCATCGACGAGGTGGCATCGGTGGTGAAGGAGCTGACAGAAGG
ACAAAGCACGTGGACCGATATCTCATTCAAGTATCCCAGCCATATCGGTCCCCAAGCTGA
CCAGGAGTGAGTTGTCTGGCTACAGTTTGCACCGACCCCGTCCAGACCATCAAAACGTCA
TTCATCTTCCAGTTGCCCGGTTGAAACCGTACTGCTGTTGATGCGAGCTCTGTATGAATA
CTTGCTGCAGACGCCTATACATTTTGAGAATGTTTTACCATATACTCCCTCTGTCTCAAA
ATAACTGTCTCAACTTTGTATTAGCTTTATTATAAATTTGTACTAAGCTTAAGACACTTA
TTTTGGGACGGAGTGGAATTGACATCATTTTGAGTATTCCTTAAGGAGTAAGTTGTAATG
AAGCCTATTGAATTTTCAATTTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_34374.3	2107	0.0	1530 - 2079	99	549 / 551	CUST_14783_PI390587928 CUST_14784_PI390587928	ABC06501 ABC06502
MLOC_34374.2	2337	0.0	1807 - 2337	100	531 / 531	CUST_14784_PI390587928	ABC06501 ABC06502
MLOC_34374.1	2182	5e-145	1904 - 2182	100	279 / 279	CUST_14784_PI390587928	ABC06501 ABC06502