barSeed - Barley Seed Development Database

Probe ABC05965

Source Contig ABC05965

barSeed

Links

Affymetrix Source Sequence (1230 bp)

>ABC05965 1230
CCCCACGTAAAGCGGACTCGGTCGATCGCCAAAGCTCACAGGTGGTTGCTGCAATGGAGT
CCACGAAGGTCTCCGCGCTGCTGGTTCTGGCCATGCTCGTGCTCTCCTCGCCCACTGTCG
TGCTCGCCTGCTCCCCCGCCTCCGGGTGCGGCAGTGGCACGCCGTCGAGCGGCACGCCCT
CGGGCGGCGGCATCAGCATCTCCCCGGTCATCGGCGTCGTCGGTGGCACCGTCACTCCGG
TCATCGGCGTCGTCGGTGGCACCGTCACTCCGGTCATCGGTGGCGCCGCCCCGACCGCGG
GCGGCGTCGTCGGCAAGGTCACCCCTGCCGTAGGCGGCATGGTCCCTGCCGTTGGCGGCG
TCGCCGGCAAAGTTGGCGGCATGGTCGCTCCAGTGGTCGGCACCGTCGGCGGCGTGGCCG
GCAAAGTCACCCCCGCCGTAGGCGGCATGGCCCCTGCCGTTGGCGGCGTGGTCGGCACCG
TTGGCGGCATGGTCGCTCCAGTGGTCGGCACCGTCGGCGGCGTGGCCGGCAAAGTCCCGG
CGGCCGGGGGAGTCGTCTCCCCCGTCGTCGGCATCATCGGTCCCATCATCGGCATCGGCG
GGAGCCCGGCGTCCCCCTCGCCCAAACGCCACGGCGGACGCAAGGCGTGCCCTCCCTCAC
CCCCGACCCCGACCCCGTCTCCCCCGACGCCCACCCCGGCGCCGACGCCCCCGACGCCCA
CGCCGTCCTCCGACACGTGCCCGATCGACACGCTGAAGCTGGGCGTGTGCCTGGACCTGC
TCGGCAACGAGCTCCACATCGGCGACGCCAGCGTCAAGTGCTGCCCCCTGGTGCAGGGCA
TCGCCGGGCTCACCGCCGCGGCGTGCCTCTGCACCGCCATCAAGGCCAAGGTGCTCAACC
TCGCCCTCTACGTGCCCCTCGCCCTCCAGCTGCTCGTCAACGACTGCGGCTGCGCCGTGC
CGCCGGGATACACCTGCGCCTGATCCGTCCGTCCGTCCGTTCCACGTTCCCGCGCATGCA
TGCAGTGCAGTGCATAATTTATTGTGCCACGAGTTTGAAATCAAGGTTGTGTCGATGAAG
CCACTCGCTTCCGGTTTGTTCATTTAGTGCTACTACAACATTTATTTTATTTTTATTATT
ATTGTCATCATTCCGTTTGAAATCTTGTAAGATTTGTATATCCAGTGGCTATGGAAGGTG
TAATTGTATGTTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355398	1820	0.0	15 - 1227	100	1213 / 1213	CUST_22102_PI390587928	ABC05965 ABC33941
MLOC_20094.1	1530	0.0	601 - 1530	99	922 / 930	None	ABC05965
MLOC_20094.2	939	0.0	119 - 544	99	420 / 426	None	ABC05965
MLOC_39958.1	654	0.0	1 - 350	100	350 / 350	CUST_22102_PI390587928	ABC05965 ABC33941
AK354089	1136	4e-128	885 - 1136	99	251 / 252	CUST_38597_PI390587928 CUST_22102_PI390587928	ABC04632 ABC04633 ABC05965 ABC33941