barSeed - Barley Seed Development Database

Probe ABC04989

Source Contig ABC04989

barSeed

Links

Affymetrix Source Sequence (607 bp)

>ABC04989 607
GGTTTCCGAAGCTCTTGAGTACGGGCTTGTCGGTGTGAATGAGGGATTGATTTCCACAGA
GGTGGCGCCATTCGGTGGGGTTAAGCAGTCTGGCCTTGGGCGGGAAGGATCAAAATATGG
CATGGATGACTTCCTGGAGGCTGGCACACACAACTCTCTAAACCGTTTCCCGACTTTAAT
CGATGCTCATTTGCTTGACCGTGGTTGCAGATTAAGTATGTATGCATGGGCAACCTGGGT
TGATGCTTGAAGTTGGCCTTCGCTTCCACCTGAATGAAGAAGGATCGAGAACCTACCGGG
GCCAAGTACGCTGATAAGCGCGGATAGCTCTGCAGGCGTAAGGTGTAAGATGGAACGAAG
AGGGAGGACAGTNNTAGAAGCTTGGAATAAAGGGAGTAGGCCGTGTCCTAATAAAAGGTA
TAAGTTCGAGTGAAGAGGGAACACAGTTTAGAAGCTTGGAATAAAGAGAATAGGCCGTGT
CCGAATAAACGGGTTGTAATGAGTTGTAAATGAATGAAACGTGAAGCACGGCTTCGTCTC
TGAACTTTGGTACTCTCCTACTAATAATCATCACGTCGTTCACTTGGTGCAAAAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62667.4	1878	5e-65	1361 - 1498	99	137 / 138	CUST_23539_PI390587928	ABC04989 ABC04991 ABC04992
MLOC_62667.5	1604	1e-66	856 - 993	100	138 / 138	CUST_23539_PI390587928	ABC04989 ABC04991 ABC04992
MLOC_62667.3	2303	0.0	1691 - 2069	98	377 / 383	CUST_23539_PI390587928	ABC04989 ABC04991 ABC04992
MLOC_62667.1	2361	1e-66	1590 - 1727	100	138 / 138	CUST_23539_PI390587928	ABC04989 ABC04991 ABC04992
MLOC_62667.6	1284	1e-66	867 - 1004	100	138 / 138	None	ABC04989 ABC04991 ABC04992