barSeed - Barley Seed Development Database

Probe ABC04289

Source Contig ABC04289

barSeed

Links

Affymetrix Source Sequence (769 bp)

>ABC04289 769
CGCATCGCTACTCCCTTAACTTCTTCCCCTTTCGACCTTGTAGGCGAACACCAACCCGAA
TCCCCACCCCGAAGGCTTCCTCCCGCGGCGAAACCCTAGCTAGCGACCGGAGCGCTCGGC
GGCGGGAGCCATGGCGGACGACGATTACAATGAAGTTGACATGGGGTATGAGGATGAGCC
TCCAGAAGCTGATATTGAGGAAGGGGTTGAAGAAGATCCTGAGAACAATGAGGATGCCCC
TGATGATGTGGTAGGGGGTGAAGGTGAAGAAAAGGAACAGGAAAAGACTGCCCGTCCACG
CAATACAACAAAATATATGACCAAATATGAGCGGGCACGCATCCTTGGCACACGTGCTTT
GCAGATAAGCATGAATGCTCCAGTTATGGTTGAGCTTGAGGGTGAAACTGATCCTCTTGA
GATTGCCATGAAAGAACTGAGAGCACGCAAGATCCCCTTCACGATTAGGCGGTACTTACC
TGATGGAAGCTATGAGGACTGGGGAGTCGACGAGCTCATTGTGGAGGACTCGTGGAAGCG
TCAAGTTGGCGGGGAGTAGAGCTGGCAGACTGTTGCTGCAACTAAACCTTGCCCTAGTAG
CTATAATATGCAATGTTTAGCACTGAATTGCTGTGACAATGTTATGTTACTGTAACATGT
GTGGACTATGGCTGCCCACTGTTGTGCTACTATAATTCAGTCGCGTGGTTGCATCAGTTT
GCTTGGACTAAAAAAAAAAAAAAAAAGTTGTGAGTGAATACCCAATCTA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_67111.7	3871	0.0	3131 - 3860	100	730 / 730	CUST_36042_PI390587928 CUST_1119_PI390587928	ABC04289 ABC04548 ABC43241
MLOC_67112.1	770	0.0	2 - 714	99	711 / 713	CUST_36042_PI390587928	ABC04289
MLOC_67112.2	445	0.0	2 - 422	100	421 / 421	None	ABC04289
MLOC_67111.4	4497	2e-85	4324 - 4495	100	172 / 172	CUST_1119_PI390587928 CUST_36042_PI390587928	ABC04289