barSeed - Barley Seed Development Database

Probe ABC04275

Source Contig ABC04275

barSeed

Links

Affymetrix Source Sequence (1014 bp)

>ABC04275 1014
CTCACTCCAACCAGGCCGGCGAGGGCGGGCCGTCGTCGGAGCCGAAGCCGGAGAGCCGAT
GGGGAACGCGTCGTCGATGCTGACGCAGTACGACATCGAGGAGGTGCAGGAGCACTGCAG
CTACCTATTCTCGCAGCAGGAGATCGTGTCGCTGTACGAGCGATTCTGCCAGCTCGACCG
CAGCGCCAAGGGGTTCGTCTCCGAGGACGAGTTCCTCTCCATCCCCGAGTTCTCCACCAA
CCCGCTCTCCCAGAGGTTGCTACGCATGGTTGATGGATTGAACTTCAAGGAATTTGTTTC
TTTTCTCTCTACCTTCAGCGCAAGGGCCAGCCTTCAGCAAAAGATTGAGTTGATATTTAA
GGTGTATGACGTTGATGGCAAGGGGAAAGTATCCTTCAAGGACCTGGTAGAGGTTTTGCG
GGATCTAACTGGCTCATCCATGTCAGAGAAACAAAGAGAGCAAGTACTAACAAAGGTGTT
GGAAGAAGCCGGATACACACAGGATTCCACCCTAGCAATAGAAGATTTTGTGACGATCAT
CGACCACCCCGGCCTGAAGATGGAGGTGGAAGTGCCCATCGACTAAGTGAACGGCGAATG
TGGATTTCAGCAGAGATGAGGATGCAAGGAGCCCTCTCTGTCTTCTGGAAACAAACAAGT
GTCCATAGCCAATAGATTGTGTGACAGAATAGAATGGGAGCTCACTGTTTTGAGCTCTTC
TGTACCTGTCCGCATACATGCCTGAATCTTACGTTTAGAGTCATATATTTTTTTCTGTTT
TGAGGGGATTGATTAATGCAGTGTCAATGTAGAGTGATTCTTGTTACAGTTTCCAGACCA
TGAAAACGTTCCAAACTTAAAAAAAAAAAAAAGTGATTTCAGCTGTCGACTACACCATAG
GAGGCCAGTATTTGTACGGAAAATCATGATCTCATCTTGGGTTCATGTGGAAAATTCATG
TCTGAATTTAAAATCTGTGAGAAAAAAAAAAAAANNNAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_61171.1	1211	0.0	1 - 857	98	843 / 857	None	ABC04275 ABC04276
MLOC_61171.2	1315	0.0	1 - 657	99	655 / 657	None	ABC04275 ABC04276
AK249781.1	922	0.0	119 - 919	90	729 / 807	CUST_22969_PI390587928	ABC04275 ABC04276 ABC37649
MLOC_15172.1	530	7e-160	186 - 530	96	332 / 345	None	ABC04275 ABC04276
MLOC_15489.1	459	5e-97	101 - 459	85	310 / 365	CUST_22969_PI390587928	ABC04275 ABC04276 ABC37649