barSeed - Barley Seed Development Database

Probe ABC03883

Source Contig ABC03883

barSeed

Links

Affymetrix Source Sequence (930 bp)

>ABC03883 930
GCCTCCTCAGGTCATCATCCTCGGCGACAGCGGGGTTGGGAAGACTTCCTTGATGAACCA
ATATGTGAACAAGAAGTTCAGCAACCAGTACAAGGCCACGATTGGCGCCGATTTCCTCAC
CAAGGAGGTGCAGTTCGAGGACAGGCTCTTCACTCTGCAAATATGGGATACTGCCGGTCA
GGAGAGGTTTCAAAGTCTTGGTGTTGCATTCTACCGTGGAGCGGATTGTTGTGTTCTAGT
TTACGATGTTAACTCCATGAAATCATTTGATAATCTGAACAACTGGCGTGAAGAGTTTCT
AATTCAGGTGAATTATCCTACATAATTCATTAACAGTCCAGAATCATGTTTTGCCTGTTT
CACTTTGGGTGTTTACTTTGACAGGCTAGCCCATCAGATCCTGATAACTTCCCTTTTGTT
CTGCTGGGTAACAAAGTTGATGTAGATGGTGGGAACAGTCGCGTGGTCTCTGAGAAAAAG
GCGAAGGCATGGTGTGCCTCTAAAGGGAACATCCCATACTTTGAGACTTCTGCCAAGGAT
GGAATCAACGTGGAGGAGGCTTTCCAGTGTATAGTAAAGAACGCTCTGAAGAATGAGCCA
GAGGAAGAATTGTATATGCCGGACACTGTGGACGTGGTGGGCGGCAACCGGGGTCAAGGA
TCGTCAGGATGCTGTTAGAACATGAGGGCCCACAACTGTGGGCTATCCTTTGACATTACT
GTATTTCCATGGCGACTTATGGACCTGTATTTCATTCGTGACCTTCTTCAATCACCTCGT
AAGTGCCCAGGGAATGATTGATGCGTCTGTTCCGATCTGTCAATTTGTGGACGTTTGTGT
AGTTTTATCATTATCATCAGTAGCGTCATATCTTGTGAATACAGTCAGCGGAATAAGTGA
AGTGTAAACTACAGTTGCTTCATTAGGTTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70429.1	2835	9e-159	1799 - 2106	99	307 / 308	CUST_36900_PI390587928	ABC03880 ABC03881 ABC03882 ABC03883 ABC24951
MLOC_70429.2	1953	9e-159	915 - 1222	99	307 / 308	CUST_36900_PI390587928	ABC03880 ABC03881 ABC03882 ABC03883 ABC24951
MLOC_54304.1	996	4e-73	604 - 900	84	249 / 298	None	ABC03880 ABC03881 ABC03882 ABC03883 ABC09378 ABC13308
AK364917	3308	2e-75	2282 - 2586	84	255 / 305	CUST_9405_PI390587928 CUST_15214_PI390587928	ABC03880 ABC03882 ABC03883 ABC09378 ABC12834 ABC13308