barSeed - Barley Seed Development Database

Probe ABC03268

Source Contig ABC03268

barSeed

Links

Affymetrix Source Sequence (1282 bp)

>ABC03268 1282
CTCTCCACAAACCCTCCTCTCTTCTTCGTCTCCGTCTCGCCGCACCCCACGCCGACGACG
CGATGATTCCCAACCTCTCCGCCCTCGAGAACCACTTCGGCGCCGCCGCTGCTGGCAGCG
ACGACTTCGGCGGCCTCTTCTCCGCCGACACCGCCGACCAGCTCGCCCTCGAGTTCCCCA
CCTGCAACGACTTCGATGGGTTCCAGAAGGCAACCAAGGAGATGGTCAACAACAAGAAGG
GGACGACCACGCTCTCCTTCATCTTCGACAAGGGCGTCATCGTCGCCGCCGACTCCCGGG
CCAGCATGGGCGGCTACATCTCTTCACAAACTGTGAGGAAAATCATTGAGATTAATCCCT
ACATGCTGGGAACCATGGCTGGAGGTGCTGCTGATTGCCAATTTTGGCATAGAAACTTGG
GGGTCAAGTGCCGGCTCCATGAGCTCGCGAACAAACGGAGGATCTCCATTGCTGGTTCTT
CAAAGACGTTGGCTAATATCCTTTATTCATACCGCGGGATGGGACTTTCAATCGGTACAA
TGATTGCTGGATTTGATGAAACTGGTCCGGGCTTGTACTATGTTGATAGCGAGGGTGCAA
GGCTCAAGGGAAGCCGATTCTCTGTTGGTTCTGGCTCTCTATATGCTTATGGCATCTTGG
ATGAGGGTTACAAATTCAACATGTCAGTTGAGGAAGCTGCTGAGTTAGCACGGCGGGCTA
TTTATCATGCAACATTCCGTGATGGAGCTAGTGGTGGCTGTGTTAGTGTCTACTACGTCG
GCCCTGACGGCTGGAAGAAGTTGTCCGGAGATGATGTCGGAGAGCTGCATTACCACTACT
ACCCAGTCCAGGCGGCTCCCGTCGAGCAAGAGATGGCCGAGGCCCCTTCTGCGTCAACCT
GATTAATGTCGTACGAAATCCTGTGAACTGTGCTGAAGCACCTTGTTTTATGGACTTGGG
GCCTGTTTGTCTCCTCCTCGACATTAGAGTGTTCTCCTCCGACTTACGCATCGGTTATGG
CGGTGTGGTTGTAGACTGATGAATGTTATAGATGTTTTCATTGAAGTTTCATTTGAATTC
GTTTGAAAAAAAAAAAAAAACTCCACGCTATCTCCGTTATACTAAATATTGTGTTGCTGC
TGAAAAAAAAAAAAAAAACAGCTGGTCATGCTTCAAGCATGGAGCTGTGTACATTGTACA
CACTAATTCGTTGAGTGATGTCCTCTAGATTCAGACTTAAATTATGTTATACGCTGGAAA
ATAAATGTAGAATGNCCCATGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251276.1	1108	0.0	15 - 1091	100	1077 / 1077	None	ABC03268 ABC03269
MLOC_34746.1	1105	0.0	80 - 1105	92	948 / 1034	None	ABC03268 ABC03269
MLOC_30248.1	755	0.0	14 - 755	99	741 / 742	None	ABC03268 ABC03269
MLOC_34746.2	1141	4e-173	656 - 1039	95	366 / 384	None	ABC03268 ABC03269
MLOC_27293.1	387	2e-166	4 - 324	99	320 / 321	None	ABC03268 ABC03269