barSeed - Barley Seed Development Database

Probe ABC02986

Source Contig ABC02986

barSeed

Links

Affymetrix Source Sequence (1664 bp)

>ABC02986 1664
TCTTACCTCTCGAAAAACAAAGCAAACCACAGCACCAGGGCACAGGCGTGGCGACGTGCC
TAGCCGGATCTGAGAGGTACGCTGAGCCCGGCACGACCTTGCCTTGTGAAGACGAATTCT
GGCTGACAGATAAAAATCTCCACCGCATCCGCAAGCGCGAACTCCCTCCCGGATCTGCAG
CTAGCTGCCTCCCGATCCCCCTCGCCTCGGCCGAGATCCTTCCTCCGGTGAGAACCAAGA
TGTACTCGTGGGAGATGCTGTCGTTCAACATCCACGATGGGTTCCTGGAGGCGATCGTGC
GGGGGAACCGCTCGGGACTCCTCACCCAAGCCGATTACAACAACCTCTGCCAGTGCGAGA
CCCTCGACGACATCAAGATGCACCTCTCCGCCACCGAGTACGGTCCATACCTCCAGAACG
AACCTTCTCCCTTGCACACAACAACAATCGTCGAGAAGTGCACTCTTAAGTTGGTTGATG
AATACAAACACATGTTGTGCCAGGCGAATGAACCTCTATCTACATTCCTACAATACATAA
CGTATGGACACATGATCGATAATGTTGTCCTTATTGTTACTGGGACATTGCATGAAAGAG
ATGTCAATGAACTGTTGGAGAAATGCCATCCATTGGGCATGTTTGATAGCATTGCATCGC
TTGCAGTTGCTCAAAATATGCGTGAGCTTTACAGGCTGGTTCTAGTTGATACACCCTTAG
CACCGTACTTCTCAGAGTGCATTACATCTGAGGATCTGGATGACATGAATATTGAGATCA
TGAGGAACACACTCTACAAAGCGTATCTTCAGGATTTTTACAAATTTTGTGCGAAACTAG
GTGGTGCGACGGCTGACATTATGTGTAATCTCCTTTCATTTGAAGCTGACAGAAGAGCTG
TAAACATTACAATAAACAGTATTGGGACTGAGCTGACTAGAGATGACCGCAGGAAGCTGT
ACTCCAATTTCGGTCTATTGTTTCCATATGGTCATGAAGAGTTGGCTGTCTGTGAAGATG
TTGACCAGGTGCGTGGTGTAATGGAGAAGTACCCCCCATACCAGTCTATTTTTGCAAAGA
TATCATATGGGGAAAGTCAGATGTTGGACAAGGCCTTCTATGAGGAGGAAGTAAAGAGGC
TGCGCCTGTCATTCGAACAGCAGTTCCACTATGCTGTTTTCTTTGCGTACATGAGGCTAC
GAGAGCAGGAGATAAGGAACTTGATGTGGATCTCCGAATGCGTTGCCCAGAACCAGAAGA
ACAGGGTCCATGACAGCGTCGTGACGATCTTTTAATCGGCCCCTATTACTGTGCATATGG
CTGTACAAAAGGCCCGCTTTGATGATGGCACAATCGATTGCACTCTTTATAAGCTCATGA
TTTGTTATTCCCCTTGTTCCTATTTTCTATGCGGCTGAAAAGCTAGAACTGGAGTAGTGT
ATCATTATTTGTTTTTGTAGCAAAATAAAAGGCGCAGTTGTACGGTAAACTAAATAAATG
ATGTTTATTTCCGTAGTGGGTGGCACTATTTGTGCAGTTTGTTGGCAATGTAAAATGTAC
ACCCAAGATATCAAATGGCTTGTTGGCAAAAAAAAAAAAAAAAATTATTATAAAATGTAA
CTTGTGCAGCTTAGAAAGGGCATGGAAATTGTTGGGCATCGTCG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251977.1	1646	0.0	15 - 1646	99	1617 / 1634	None	ABC02986 ABC33875
AK250617.1	2521	0.0	1066 - 2521	99	1454 / 1456	None	ABC01916 ABC02986 ABC33875
MLOC_69859.1	1092	0.0	1 - 814	99	810 / 816	None	ABC02986
MLOC_69859.2	637	0.0	1 - 557	100	557 / 557	None	ABC02986
MLOC_16644.2	1985	0.0	1161 - 1665	98	494 / 505	CUST_8897_PI390587928	ABC02986 ABC33875
MLOC_16645.1	962	0.0	1 - 499	98	488 / 499	None	ABC02986 ABC33875
MLOC_35591.1	568	1e-99	369 - 566	100	198 / 198	None	ABC02986
MLOC_33864.1	655	3e-66	479 - 616	100	138 / 138	None	ABC02986