barSeed - Barley Seed Development Database

Probe ABC02958

Source Contig ABC02958

barSeed

Links

Affymetrix Source Sequence (1339 bp)

>ABC02958 1339
GCCGACACAGACCATGTGCCCGCGCCGGCCGCATTATCGAAGCCGCTGCCGTGACGCCGC
CCCACCGCCAGTTCACCACCAGCTCCAGCACAACAAGAGCATCTAATAATAAGCTTCAGG
CTAAAAGGGGAACAGCACACTGACACCGTCGCAGCAGAAGCAGAAGCAGAAGAGAAGCAG
AGCAGCGGCGGCGACCATGGCGCCAAGGTCAGACCTCCTCGCCGCGCTAGCGTTGGCCCT
CCTCGCCGCGAGCGTCCTTAGTACGGGGGCCAAGGCCGACTTCGACGACCAGTTCGAGGT
GATCGGCGACCGCGACCACATCGGGTACCGGGACGACGGCAACGACAAGGGCCAGGAGTT
CTCGCTGGAGCTCGACCAGGAGTCCGGCTCCGGCTTCAAGTCCAAGGCCAAGTACCTCTT
CGGCGAGTTCCAGGTCCGGATGAAGCTCGTCGACGGCAACTCCGCCGGCACCGTCACCTC
CTTCTACCTGACCTCCGGCGAGAGCGCCACCCACGACGAGATCGACATCGAGTTCATGGG
AAACTCGAGCGGCGACCCCTACGTGATGAACACCAACGTCTGGGCCAGCGGCGACGGCAA
GAAGGAGCACCAGTTCTACCTCTGGTTCGACCCCTCCGCCGACTTCCACACCTACAAGAT
CACATGGAACCCAAAGAACATCATATTCGAGGTGGACGGCGTGCCGGTGAGGACCTTCAA
GAAGTACGACGGCCTGCCGTTCCCGTCGGCGCGGCCGATGACGGTGCACGCGACGCTGTG
GGACGGCAGCTACTGGGCGACGCAGCACGGCACCGTCAAGATCCACTGGCGCCACGACCC
CTTCGTCGTCCCCTACCAGGGCTACCACGCCAACGGCTGCGTCCACGACAAGGCCACCAA
CAAGACCTCCTGCCCCGCCGGCAGCGACGCCTGGATGCACCGCGAGCTCGACGACGGCGA
GCTCAGCACCGTCGCGTGGGCCGAGCGCAACTGCCTCTCCTACAACTACTGCGCCGACGG
ATGGCGCTTCCCCAAGGGCTTCCCCGGCGAGTGCGGACGCAAGTGATGATGATGATGATG
ATGATTAGTGGCTGTCCAGGATTTGATTAATTTGATTCTTGATTAGTAGTGGTGCTGCAG
AACAGAATTGCCCTTCTTCTTGTTCGTTTCATGATTCCATTATTGGACATGTACATGTCT
TCTTACCTTACATTACATTACATTACCGGCCCCATTTTTCTCCCGTGTATGTACATTTTT
GCAATCTTTAATTGGTTAGAAATGTGAAGAAAGTGAGAGGGAAAGGGTGTGTCCCTATAG
TAAAAAAAAAAAAAAAAGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62873.1	1745	0.0	559 - 1745	100	1187 / 1187	None	ABC02957 ABC02958
MLOC_62873.2	1656	0.0	1237 - 1656	99	419 / 420	None	ABC02957 ABC02958
MLOC_14727.2	1516	0.0	266 - 929	86	582 / 675	CUST_393_PI415269222	ABC02957 ABC02958 ABC33947
MLOC_14727.1	1444	0.0	291 - 954	86	582 / 675	CUST_393_PI415269222 CUST_38625_PI390587928	ABC02957 ABC02958 ABC33947
AK361278	1150	6e-122	316 - 965	79	523 / 660	CUST_2925_PI390587928	ABC02951 ABC02952 ABC02957 ABC02958
MLOC_65765.1	1374	6e-122	516 - 1165	79	523 / 660	CUST_2925_PI390587928	ABC02951 ABC02952 ABC02957 ABC02958
MLOC_2539.1	1209	4e-79	310 - 803	78	386 / 497	CUST_395_PI415269222 CUST_15907_PI390587928	ABC02951 ABC02952 ABC02957 ABC02958
MLOC_80115.1	1173	2e-72	417 - 910	77	382 / 497	CUST_4626_PI390587928	ABC02951 ABC02952 ABC02957 ABC02958