barSeed - Barley Seed Development Database

Probe ABC02852

Source Contig ABC02852

barSeed

Links

Affymetrix Source Sequence (1086 bp)

>ABC02852 1086
GGAACAGAGTCTCAGTGGAACAACATACGCACCGGAACTCTCAAAGCGGAAGCCTCTCTC
ACCGGCGACGACGCGCACCAGCAGCGATGGCCCGCTACGACCGAGCGATCACCGTCTTCT
CCCCCGACGGCCACCTCTTCCAGGTTGAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACG
CCGCTGTCGGCGTCCGAGGCGTCGACACCGTCGTCCTCGGTGTCGAGAAGAAGTCCACCC
CCAAGCTCCAGGACTCCAGGTCCGTGCGCAAGATCGCGAGCCTGGACACCCACGTCGCGC
TGGCCTGCGCGGGTCTGAAGGCGGACGCGCGCGTGCTTATCAACCGGGCGCGCGTCGAGT
GTCAGAGCCACCGCCTCACCGTCGAGGACCCCGTCACTGTCGAGTACATCACGCGCTACA
TCGCCGGCCTGCAGCAGAAGTACACGCAGAGCGGAGGGGTGCGCCCATTCGGGCTTTCCA
CGCTCATAGTTGGCTTCGACCCCTATACTGAGAAGCCCGCGCTGTACCAGACCGACCCCT
CCGGCACCTTCTCTGCCTGGAAGGCCAACGCCACCGGCCGCAACTCCAACTCCATGCGCG
AGTTCCTTGAGAAGAATTACAAGGAGACGTCCGGCAAGGAGACCATCAAGCTTACCATCC
GAGCCCTTCTTGAGGTTGTCGAGAGTGGTGGCAAGAACATTGAGATCGCTGTGATGACGC
ACAAAGATGGTCTTCGCCAACTTGAGGAAGACGAGATCGATGAGTACGTTGCTGAGATCG
AAACAGAGAAGGCTGCTGCTGAGGCTGCAAAGAAGGGTGGCCCGAAAGACACATGATGTA
CTAATGATTTAGCACAGTCGCGGCACATGGCTCCTCTAGCTCTATTTATGTTCACAGCTT
GTCTGCTTGTCTTAACTGTTTCCGAAGAACTTGTTTGGCGGAAGGTTGTTTATTTGTTGC
TGACGGAGGTGCTTGGACTAATGGGCTTGATCCCGTCATGTGCGAACTGTAAGCTTAGCT
ATAATGGCCGTTACCGGGGCCGTGGATGTGAAGTGGGCTGAGTTATCCTAAAAAAAAAAA
AAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360130	1301	0.0	2 - 1055	100	1054 / 1054	CUST_37529_PI390587928 CUST_4580_PI390587928 CUST_2571_PI390587928	ABC02851 ABC02852
AK249988.1	994	0.0	30 - 994	99	964 / 965	CUST_4580_PI390587928	ABC02851 ABC02852
MLOC_68374.1	778	0.0	102 - 776	100	675 / 675	None	ABC02851 ABC02852
AK250196.1	992	0.0	87 - 844	90	683 / 760	CUST_22770_PI390587928	ABC02851 ABC02852
MLOC_18437.1	1628	0.0	456 - 863	99	405 / 408	CUST_37529_PI390587928 CUST_2571_PI390587928	ABC02852
MLOC_25136.1	383	1e-122	1 - 383	87	335 / 383	None	ABC02851 ABC02852
MLOC_46822.1	302	1e-112	3 - 301	91	273 / 299	None	ABC02851 ABC02852
MLOC_27434.1	249	9e-75	3 - 245	88	213 / 243	None	ABC02851 ABC02852
MLOC_35679.1	226	1e-73	1 - 226	89	201 / 226	None	ABC02851 ABC02852
MLOC_9393.1	213	9e-65	1 - 213	88	187 / 213	None	ABC02851 ABC02852
MLOC_21067.1	361	4e-63	1 - 162	94	152 / 162	None	ABC02851 ABC02852